More than 300 homologs were found in PanDaTox collection
for query gene Gobs_1033 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_1033  GTP-binding protein YchF  100 
 
 
357 aa  715    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  78.71 
 
 
357 aa  581  1.0000000000000001e-165  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  78.12 
 
 
361 aa  548  1e-155  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  76.18 
 
 
361 aa  546  1e-154  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  78.67 
 
 
361 aa  546  1e-154  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  75.21 
 
 
363 aa  534  1e-151  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  74.45 
 
 
364 aa  536  1e-151  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  74.52 
 
 
361 aa  532  1e-150  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  74.17 
 
 
360 aa  533  1e-150  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  76.26 
 
 
358 aa  528  1e-149  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  76.04 
 
 
359 aa  529  1e-149  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  72.65 
 
 
362 aa  528  1e-149  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  73.31 
 
 
358 aa  523  1e-147  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  71.59 
 
 
361 aa  523  1e-147  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  76.45 
 
 
361 aa  520  1e-146  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
358 aa  519  1e-146  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  73.48 
 
 
362 aa  518  1e-146  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  72.45 
 
 
373 aa  520  1e-146  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  74.23 
 
 
360 aa  516  1.0000000000000001e-145  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
369 aa  517  1.0000000000000001e-145  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  71.47 
 
 
368 aa  508  1e-143  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  71.99 
 
 
357 aa  504  9.999999999999999e-143  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  75.49 
 
 
359 aa  505  9.999999999999999e-143  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  71.03 
 
 
359 aa  501  1e-141  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  71.19 
 
 
363 aa  501  1e-141  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  71.51 
 
 
359 aa  503  1e-141  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  72.83 
 
 
360 aa  502  1e-141  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  71.51 
 
 
358 aa  496  1e-139  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  73.16 
 
 
376 aa  496  1e-139  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  73.16 
 
 
376 aa  497  1e-139  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  69.25 
 
 
361 aa  497  1e-139  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  73.16 
 
 
376 aa  497  1e-139  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  68.14 
 
 
361 aa  491  9.999999999999999e-139  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  70.64 
 
 
361 aa  485  1e-136  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  71.99 
 
 
357 aa  481  1e-134  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  70.9 
 
 
354 aa  475  1e-133  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  64.64 
 
 
362 aa  473  1e-132  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  63.54 
 
 
364 aa  451  1e-125  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  57.22 
 
 
354 aa  405  1.0000000000000001e-112  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  58.06 
 
 
354 aa  404  1e-111  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  56.67 
 
 
354 aa  395  1e-109  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  55.1 
 
 
363 aa  397  1e-109  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  55.65 
 
 
361 aa  390  1e-107  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  53.59 
 
 
362 aa  385  1e-106  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  56.35 
 
 
363 aa  385  1e-106  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  56.2 
 
 
363 aa  387  1e-106  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  55.31 
 
 
365 aa  385  1e-106  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  55.28 
 
 
354 aa  387  1e-106  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  53.7 
 
 
365 aa  383  1e-105  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  54.27 
 
 
363 aa  382  1e-105  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  54.27 
 
 
363 aa  382  1e-105  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  55.65 
 
 
387 aa  384  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  55.92 
 
 
363 aa  382  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_008789  Hhal_0986  GTP-binding protein YchF  55.1 
 
 
363 aa  382  1e-105  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  54.5 
 
 
367 aa  382  1e-105  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  54.55 
 
 
363 aa  382  1e-105  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  54.1 
 
 
366 aa  380  1e-104  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2022  GTP-dependent nucleic acid-binding protein EngD  53.44 
 
 
363 aa  379  1e-104  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  53.15 
 
 
365 aa  380  1e-104  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  54.12 
 
 
364 aa  380  1e-104  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_013946  Mrub_1204  GTP-binding protein YchF  57.84 
 
 
372 aa  379  1e-104  Meiothermus ruber DSM 1279  Bacteria  normal  0.590839  normal  0.981589 
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  53.15 
 
 
365 aa  380  1e-104  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  54.92 
 
 
364 aa  377  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_003295  RSc2898  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
364 aa  375  1e-103  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0155  GTP-binding protein YchF  55.22 
 
 
364 aa  376  1e-103  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.611358  normal  0.940592 
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  53.99 
 
 
363 aa  375  1e-103  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  54.12 
 
 
364 aa  375  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  375  1e-103  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000898424  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  54.52 
 
 
363 aa  376  1e-103  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  54.92 
 
 
364 aa  377  1e-103  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1909  GTP-dependent nucleic acid-binding protein EngD  52.34 
 
 
363 aa  375  1e-103  Psychrobacter sp. PRwf-1  Bacteria  normal  0.186477  normal 
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  52.62 
 
 
363 aa  377  1e-103  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  54.67 
 
 
364 aa  375  1e-103  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
364 aa  377  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1534  GTP-binding protein YchF  54.64 
 
 
364 aa  377  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.452605 
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
364 aa  372  1e-102  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  53.01 
 
 
366 aa  373  1e-102  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
366 aa  372  1e-102  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
366 aa  372  1e-102  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
366 aa  372  1e-102  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
364 aa  372  1e-102  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
366 aa  373  1e-102  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  53.72 
 
 
363 aa  373  1e-102  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000000959871  n/a   
 
 
-
 
NC_009636  Smed_2266  GTP-dependent nucleic acid-binding protein EngD  55.16 
 
 
367 aa  373  1e-102  Sinorhizobium medicae WSM419  Bacteria  normal  0.83049  normal  0.983976 
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000208433  normal  0.179939 
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella sp. MR-7  Bacteria  unclonable  0.00000596539  normal  0.137935 
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  53.55 
 
 
364 aa  372  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  53.55 
 
 
364 aa  372  1e-102  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000459769  n/a   
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  54.1 
 
 
364 aa  372  1e-102  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
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