Gene Tgr7_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0530 
Symbol 
ID7317721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp561212 
End bp562303 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID643615414 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002512614 
Protein GI220933715 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTGA AATGCGGAAT TGTCGGATTA CCCAATGTCG GTAAATCCAC CCTGTTCAAC 
GCCCTGACCC GCGCGGGCAT CCAGGCGGAG AACTATCCCT TCTGCACCAT CGACCCCAAC 
GTGGGCGTGG TGCCGGTGCC GGATCCGCGC CTGGACGCGC TCGCGGCCAT CGTCAAGCCG 
GAGAAGCTGA TTCCCACCGC CATGGAGTTC GTGGACATCG CGGGGCTCGT CGCCGGCGCC 
TCCCAGGGCG AGGGCCTGGG CAACCAGTTC CTGGCCCACA TCCGCGAGAC CGATGCCATC 
GCCCACGTGG TGCGCTGCTT CGAGAACGAC GACGTGATCC ACGTGGCCGG CCGGGTGGAT 
CCCCTCTCCG ACATCGAGGT GATCAACACC GAGCTGGCCC TGGCCGACCT GGAGACCGTG 
GAGAAGGCGC TCAACCGACT GACCCGCTCC GCCAAGTCCG GGGACAAGGA GGCGGTGGCG 
CGCAAGAACG TGGCCGAGAA GGTGCAGGCG GTGCTGGCCG AGGGCAAGGC CGCCCGGGCC 
GCGGACCTGG ACGACGAGGA GCGCAAACTG TTGCGGGAGT TTCACCTGAT CACCGCCAAG 
CCCGCCATGT ACATCGCCAA CGTCAACGAG GACGGCTTCG AGAACAACCC GCTGCTGGAC 
CGGGTGCGAG AGTACGCTGC CGCCGAGCAC GCCCAGGTGG TGCCCGTGTG CGCCGCCATC 
GAAGCCGAGA TCGCCCAGCT CGAGGACGAC GAGAAGACCG AGTTCCTGGC CGAGATGGGT 
CTCGACGAGC CGGGTCTCAA CCGGGTGATC CGGGCCGCCT ACGAGCTGCT GGGCCTGCAG 
ACCTTCTTCA CCGCCGGACC CAAGGAGGTG CGCGCCTGGA CCGTCAAGCG CGGCGCCACC 
GCCCCCAAGG CCGCCGCCGT GATCCACACC GACTTCGAGA AGGGCTTCAT CCGCGCCGAG 
GTGGTGGGCT ACGAGGACTT CATCGCCGGC AAGGGCGAGC AGGGCGCCAA GGACGCAGGC 
AAGTGGCGCC TGGAGGGCAA GGAGTACGTG ATGAAGGAAG GGGACGTGGT CCACTTCCGC 
TTTAACGTAT AA
 
Protein sequence
MSLKCGIVGL PNVGKSTLFN ALTRAGIQAE NYPFCTIDPN VGVVPVPDPR LDALAAIVKP 
EKLIPTAMEF VDIAGLVAGA SQGEGLGNQF LAHIRETDAI AHVVRCFEND DVIHVAGRVD 
PLSDIEVINT ELALADLETV EKALNRLTRS AKSGDKEAVA RKNVAEKVQA VLAEGKAARA 
ADLDDEERKL LREFHLITAK PAMYIANVNE DGFENNPLLD RVREYAAAEH AQVVPVCAAI 
EAEIAQLEDD EKTEFLAEMG LDEPGLNRVI RAAYELLGLQ TFFTAGPKEV RAWTVKRGAT 
APKAAAVIHT DFEKGFIRAE VVGYEDFIAG KGEQGAKDAG KWRLEGKEYV MKEGDVVHFR 
FNV