Gene Amir_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0736 
Symbol 
ID8324899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp814869 
End bp815948 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID644941280 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_003098545 
Protein GI256374885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTTGA CCCTCGGTAT CGTCGGCCTG CCCAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCCCTCACGC GCAACGACGT GCTCGCGGCG AACTACCCGT TCGCCACGAT CGAGCCGAAC
GTCGGTGTGG TGCCGTTGCC GGATGCCAGG CTGGGCAAGC TGGCGGAGGT CTTCGGCTCC
GAGCGCGAGG TGCCCGCCGT GGTGTCGTTC GTCGACATCG CGGGCATCGT CAAGGGCGCC
TCCGAAGGCG CGGGCCTCGG CAACAAGTTC CTCGCGAACA TCCGCGAGGC CAACGCGATC
TGCCAGGTCG TCCGCGTGTT CGACGACTCG GACGTGATCC ACGTCGACGA CCGCGTCGAC
CCGGTCGCGG ACATCGAGAC GATCAACACC GAGCTGGTGC TGGCCGACCT CCAGACCCTG
GAGAAGGCCA TCCCCAGGTT GGAGAAGGAG GCGCGGACCC AGAAGGACCG CCGCCCCGCA
CTGGAGGCCG CGCAGAAGGC CCGCGAGATC CTCGACGCCG GGCGCACCCT GTTCTCCGCG
CAGGCCGAGG TCGACGGCGA GCTGCTGCGC GAGCTGAGCC TGCTCACCAC CAAGCCGTTC
CTGTACGTGT TCAACGCCGA CGAGGGCGTG CTCACGGACG AGGCGAGGCT CAAGGAGCTG
CGCGAGCTGG TCGCGCCCGC CGACGCGGTG TTCCTCGACG CCAAGGTCGA GGCCGAGCTG
CTGGAGCTGG ACGAGGAGTC GGCGCGCGAG CTGCTGGAGT CGATCGGCCA GCACGAGCCG
GGCCTGCACG CCCTGGCCCG CGCGGGCTTC CACACCCTCG GGCTCCAGAC CTACCTGACG
GCGGGCCCGA AGGAGGCGCG CGCCTGGACG ATCCCGAAGG GCGCGACCGC CCCGCAGGCC
GCGGGCGTGA TCCACACGGA CTTCGAGCGC GGGTTCATCA AGGCCGAGGT CGTGTCGTTC
GCGGACCTCG TGGAGACCGG CTCGATGGCT GCCGCGAAGG CGGCGGGCAA GGTCCGCATG
GAGGGCAAGG ACTACGTGAT GGTGGACGGG GACGTGGTGG AGTTCCGGTT CAACGTGTAG
 
Protein sequence
MSLTLGIVGL PNVGKSTLFN ALTRNDVLAA NYPFATIEPN VGVVPLPDAR LGKLAEVFGS 
EREVPAVVSF VDIAGIVKGA SEGAGLGNKF LANIREANAI CQVVRVFDDS DVIHVDDRVD
PVADIETINT ELVLADLQTL EKAIPRLEKE ARTQKDRRPA LEAAQKAREI LDAGRTLFSA
QAEVDGELLR ELSLLTTKPF LYVFNADEGV LTDEARLKEL RELVAPADAV FLDAKVEAEL
LELDEESARE LLESIGQHEP GLHALARAGF HTLGLQTYLT AGPKEARAWT IPKGATAPQA
AGVIHTDFER GFIKAEVVSF ADLVETGSMA AAKAAGKVRM EGKDYVMVDG DVVEFRFNV