More than 300 homologs were found in PanDaTox collection
for query gene Amir_0736 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
359 aa  714    Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  85.56 
 
 
360 aa  615  1e-175  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  83.29 
 
 
359 aa  560  1e-158  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  81.62 
 
 
360 aa  554  1e-156  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  78.55 
 
 
359 aa  551  1e-156  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  80.22 
 
 
360 aa  539  9.999999999999999e-153  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  79.21 
 
 
376 aa  536  1e-151  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  79.21 
 
 
376 aa  536  1e-151  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  79.21 
 
 
376 aa  536  1e-151  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  73.2 
 
 
361 aa  524  1e-148  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  74.52 
 
 
361 aa  526  1e-148  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  75.77 
 
 
357 aa  527  1e-148  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  73.68 
 
 
368 aa  522  1e-147  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  72.8 
 
 
364 aa  519  1e-146  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  76.18 
 
 
361 aa  518  1e-146  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  70.47 
 
 
357 aa  516  1.0000000000000001e-145  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  76.04 
 
 
357 aa  514  1.0000000000000001e-145  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  77.99 
 
 
357 aa  511  1e-144  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
361 aa  513  1e-144  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  72.58 
 
 
363 aa  514  1e-144  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  73.28 
 
 
363 aa  512  1e-144  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  74.02 
 
 
358 aa  511  1e-144  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  71.47 
 
 
361 aa  509  1e-143  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
361 aa  509  1e-143  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  74.24 
 
 
361 aa  507  9.999999999999999e-143  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  73.26 
 
 
358 aa  506  9.999999999999999e-143  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  70.72 
 
 
362 aa  501  1e-141  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  71.55 
 
 
369 aa  498  1e-140  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  73.26 
 
 
358 aa  501  1e-140  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  73.26 
 
 
358 aa  499  1e-140  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
361 aa  496  1e-139  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  74.01 
 
 
354 aa  497  1e-139  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  69.36 
 
 
361 aa  496  1e-139  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  70.83 
 
 
359 aa  494  9.999999999999999e-139  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  70.72 
 
 
362 aa  483  1e-135  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  69.86 
 
 
373 aa  484  1e-135  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  64.36 
 
 
362 aa  469  1.0000000000000001e-131  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  63.54 
 
 
364 aa  444  1e-123  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  59.67 
 
 
354 aa  406  1.0000000000000001e-112  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  58.84 
 
 
354 aa  397  1e-109  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  55.65 
 
 
363 aa  390  1e-107  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  54.92 
 
 
363 aa  385  1e-106  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  58.01 
 
 
354 aa  387  1e-106  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  53.83 
 
 
365 aa  383  1e-105  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  54.74 
 
 
366 aa  381  1e-105  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  54.37 
 
 
365 aa  384  1e-105  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  54.64 
 
 
363 aa  384  1e-105  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  54.37 
 
 
365 aa  384  1e-105  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  56.87 
 
 
363 aa  379  1e-104  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
366 aa  380  1e-104  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_008532  STER_0005  GTP-dependent nucleic acid-binding protein EngD  54.18 
 
 
371 aa  379  1e-104  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  53.59 
 
 
362 aa  375  1e-103  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  55.49 
 
 
364 aa  376  1e-103  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  375  1e-103  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_008528  OEOE_0117  GTPase, translation factor  52.59 
 
 
367 aa  376  1e-103  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  53.55 
 
 
366 aa  377  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_004116  SAG0006  GTP-dependent nucleic acid-binding protein EngD  52.83 
 
 
371 aa  374  1e-102  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  374  1e-102  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  53.7 
 
 
363 aa  372  1e-102  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  54.17 
 
 
354 aa  374  1e-102  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  53.68 
 
 
367 aa  372  1e-102  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  52.85 
 
 
366 aa  373  1e-102  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  54.1 
 
 
366 aa  370  1e-101  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  55.62 
 
 
387 aa  370  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  52.34 
 
 
363 aa  369  1e-101  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  54.37 
 
 
364 aa  371  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  52.07 
 
 
363 aa  370  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  52.63 
 
 
361 aa  368  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_007951  Bxe_A0450  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
364 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  51.24 
 
 
363 aa  368  1e-101  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000898424  n/a   
 
 
-
 
NC_008786  Veis_0466  GTP-binding protein YchF  54.95 
 
 
364 aa  370  1e-101  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0445  GTP-binding protein YchF  51.88 
 
 
373 aa  365  1e-100  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.0330999  normal 
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  54.92 
 
 
364 aa  365  1e-100  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2898  GTP-dependent nucleic acid-binding protein EngD  53.83 
 
 
364 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  53.57 
 
 
364 aa  366  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
364 aa  367  1e-100  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  54.92 
 
 
364 aa  365  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  54.92 
 
 
364 aa  366  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  55.65 
 
 
363 aa  368  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_009800  EcHS_A1308  GTP-dependent nucleic acid-binding protein EngD  52.19 
 
 
363 aa  366  1e-100  Escherichia coli HS  Bacteria  normal  0.253077  n/a   
 
 
-
 
NC_010681  Bphyt_3507  GTP-dependent nucleic acid-binding protein EngD  53.3 
 
 
364 aa  366  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  0.125034  normal  0.0137315 
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  52.07 
 
 
363 aa  366  1e-100  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
NC_009801  EcE24377A_1350  GTP-dependent nucleic acid-binding protein EngD  52.19 
 
 
363 aa  366  1e-100  Escherichia coli E24377A  Bacteria  normal  0.0630481  n/a   
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  51.78 
 
 
365 aa  366  1e-100  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  54.37 
 
 
364 aa  365  1e-100  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  54.92 
 
 
364 aa  365  1e-100  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1939  GTP-dependent nucleic acid-binding protein EngD  52.19 
 
 
363 aa  366  1e-100  Escherichia coli SMS-3-5  Bacteria  normal  0.256808  normal  0.0918473 
 
 
-
 
NC_010531  Pnec_0155  GTP-binding protein YchF  53.57 
 
 
364 aa  366  1e-100  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.611358  normal  0.940592 
 
 
-
 
NC_010468  EcolC_2423  GTP-dependent nucleic acid-binding protein EngD  52.19 
 
 
363 aa  366  1e-100  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0847638 
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
364 aa  365  1e-100  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0349  GTPase, translation factor  51.91 
 
 
366 aa  365  1e-100  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
364 aa  367  1e-100  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2043  GTP-dependent nucleic acid-binding protein EngD  51.94 
 
 
363 aa  365  1e-100  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
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