Gene SAG0006 details

Gene Information

• Locus tag: SAG0006
• Symbol: ychF
• ID: 1012724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 4477
• End bp: 5592
• Gene Length: 1116 bp
• Protein Length: 371 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637315129
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: NP_687042
• Protein GI: 22536191
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTAA CAGCAGGTAT TGTAGGCTTA CCAAATGTTG GTAAATCAAC TTTATTTAAC 
GCAATTACAA AAGCAGGAGC AGAAGCTGCT AATTATCCTT TTGCGACTAT TGATCCCAAT 
GTTGGTATGG TAGAAGTACC AGATGAGCGT CTACAAAAAT TGACAGAATT GATTACGCCT 
AAAAAAACAG TTCCGACAAC CTTTGAATTT ACTGATATTG CAGGTATTGT TAAAGGTGCT 
TCGAAGGGGG AAGGTCTAGG TAATAAATTT TTAGCTAATA TTCGTGAAGT GGATGCTATT 
GTTCATGTGG TACGTGCGTT TGATGATGAA AATGTTATGC GTGAACAAGG TCGTGAGGAT 
GCTTTCGTTG ATCCTATAGC AGATATTGAT ACTATTAATC TTGAATTAAT CTTAGCTGAT 
TTAGAGTCAA TCAATAAACG TTATGCGCGT GTTGAAAAAA TGGCACGAAC TCAAAAAGAT 
AAAGAATCAG TAGCAGAGTT CAATGTTTTA CAAAAGATTA AACCTGTTTT GGAAGATGGG 
AAATCAGCTC GTACCATTGA GTTTACAGAA GAGGAAGCAA AAGTTGTTAA AGGTCTTTTT 
TTATTAACAA CTAAACCTGT TTTATATGTT GCTAATGTTG ATGAGGACAA AGTAGCTGAT 
CCTGATGATA TCGACTATGT TAATCAAATT CGTGCATTTG CAGAAACAGA GAATGCAGAA 
GTAGTCGTGA TTTCTGCTCG AGCTGAAGAA GAAATATCTG AACTTGATGA TGAAGATAAG 
TTAGAATTTT TAGAAGCTAT TGGATTAACA GAATCTGGTG TTGATAAATT AACACGAGCT 
GCTTATCATC TTTTAGGCCT TGGAACTTAC TTTACTGCTG GTGAAAAAGA GGTTCGCGCT 
TGGACGTTTA AGCGTGGTAT AAAAGCTCCA CAAGCTGCTA GTATTATCCA TTCAGATTTT 
GAAAGAGGTT TTATTCGTGC AGTAACGATG TCATATGATG ACCTTATTCA ATATGGATCT 
GAAAAAGCAG TAAAAGAAGC TGGCCGGTTA CGTGAAGAAG GAAAAGAGTA TATTGTTCAA 
GATGGCGATA TCATGGAATT CCGTTTCAAT GTCTAG 

 

Protein sequence

MALTAGIVGL PNVGKSTLFN AITKAGAEAA NYPFATIDPN VGMVEVPDER LQKLTELITP 
KKTVPTTFEF TDIAGIVKGA SKGEGLGNKF LANIREVDAI VHVVRAFDDE NVMREQGRED 
AFVDPIADID TINLELILAD LESINKRYAR VEKMARTQKD KESVAEFNVL QKIKPVLEDG 
KSARTIEFTE EEAKVVKGLF LLTTKPVLYV ANVDEDKVAD PDDIDYVNQI RAFAETENAE 
VVVISARAEE EISELDDEDK LEFLEAIGLT ESGVDKLTRA AYHLLGLGTY FTAGEKEVRA 
WTFKRGIKAP QAASIIHSDF ERGFIRAVTM SYDDLIQYGS EKAVKEAGRL REEGKEYIVQ 
DGDIMEFRFN V