More than 300 homologs were found in PanDaTox collection
for query gene Strop_3781 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  97.51 
 
 
361 aa  659    Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
361 aa  719    Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  73.13 
 
 
357 aa  550  1e-155  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  73.68 
 
 
361 aa  546  1e-154  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  72.93 
 
 
362 aa  541  1e-153  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  78.12 
 
 
357 aa  537  1e-151  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  74.38 
 
 
363 aa  533  1e-150  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  72.53 
 
 
361 aa  527  1e-149  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  72.58 
 
 
368 aa  525  1e-148  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  73.06 
 
 
358 aa  522  1e-147  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  72.65 
 
 
362 aa  523  1e-147  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
359 aa  520  1e-146  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
369 aa  520  1e-146  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  71.27 
 
 
360 aa  517  1.0000000000000001e-145  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
363 aa  517  1.0000000000000001e-145  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
361 aa  513  1e-144  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  68.7 
 
 
361 aa  508  1e-143  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  69.51 
 
 
364 aa  507  9.999999999999999e-143  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  67.41 
 
 
361 aa  498  1e-140  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  70.36 
 
 
358 aa  492  9.999999999999999e-139  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  68.98 
 
 
358 aa  493  9.999999999999999e-139  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  68.51 
 
 
359 aa  492  9.999999999999999e-139  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  68.98 
 
 
359 aa  489  1e-137  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
360 aa  489  1e-137  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  68.39 
 
 
373 aa  491  1e-137  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  71.19 
 
 
360 aa  490  1e-137  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  72.02 
 
 
359 aa  486  1e-136  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  68.98 
 
 
358 aa  483  1e-135  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  478  1e-134  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  68.98 
 
 
361 aa  478  1e-134  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  478  1e-134  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  70.62 
 
 
354 aa  479  1e-134  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  66.48 
 
 
361 aa  479  1e-134  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  68.7 
 
 
357 aa  480  1e-134  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  478  1e-134  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
357 aa  466  9.999999999999999e-131  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  61.6 
 
 
362 aa  465  9.999999999999999e-131  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  61.88 
 
 
364 aa  444  1.0000000000000001e-124  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  57.38 
 
 
354 aa  402  1e-111  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.92 
 
 
354 aa  397  1e-109  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  55.31 
 
 
354 aa  387  1e-106  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  53.49 
 
 
366 aa  386  1e-106  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  52.83 
 
 
366 aa  378  1e-104  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
363 aa  381  1e-104  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  52.29 
 
 
366 aa  376  1e-103  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  52.29 
 
 
366 aa  375  1e-103  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  53.44 
 
 
362 aa  375  1e-103  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  53.6 
 
 
354 aa  377  1e-103  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  375  1e-103  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  51.61 
 
 
366 aa  378  1e-103  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  55.01 
 
 
365 aa  376  1e-103  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
CP001509  ECD_01178  translation-associated GTPase  51.37 
 
 
363 aa  371  1e-102  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2444  GTP-binding protein YchF  51.65 
 
 
363 aa  373  1e-102  Escherichia coli DH1  Bacteria  normal  0.0781916  n/a   
 
 
-
 
NC_010498  EcSMS35_1939  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Escherichia coli SMS-3-5  Bacteria  normal  0.256808  normal  0.0918473 
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01188  hypothetical protein  51.37 
 
 
363 aa  371  1e-102  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  53.95 
 
 
364 aa  371  1e-102  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_012880  Dd703_1849  GTP-dependent nucleic acid-binding protein EngD  52.2 
 
 
363 aa  373  1e-102  Dickeya dadantii Ech703  Bacteria  normal  0.476561  n/a   
 
 
-
 
NC_010658  SbBS512_E1367  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Shigella boydii CDC 3083-94  Bacteria  normal  0.37474  n/a   
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  51.89 
 
 
363 aa  372  1e-102  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000898424  n/a   
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  374  1e-102  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  51.61 
 
 
365 aa  374  1e-102  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_011353  ECH74115_1684  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000467912  normal  0.464774 
 
 
-
 
NC_009801  EcE24377A_1350  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Escherichia coli E24377A  Bacteria  normal  0.0630481  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2423  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0847638 
 
 
-
 
NC_009800  EcHS_A1308  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  373  1e-102  Escherichia coli HS  Bacteria  normal  0.253077  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  54.25 
 
 
364 aa  372  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  51.61 
 
 
365 aa  374  1e-102  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  50.54 
 
 
365 aa  370  1e-101  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  51.61 
 
 
363 aa  368  1e-101  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  51.61 
 
 
363 aa  368  1e-101  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
363 aa  370  1e-101  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  53.42 
 
 
364 aa  369  1e-101  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  54.67 
 
 
363 aa  369  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
367 aa  370  1e-101  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_012912  Dd1591_2063  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
363 aa  368  1e-101  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  54.35 
 
 
366 aa  370  1e-101  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  53.26 
 
 
364 aa  369  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_009524  PsycPRwf_1909  GTP-dependent nucleic acid-binding protein EngD  52.89 
 
 
363 aa  367  1e-100  Psychrobacter sp. PRwf-1  Bacteria  normal  0.186477  normal 
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
363 aa  365  1e-100  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  366  1e-100  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000459769  n/a   
 
 
-
 
NC_007204  Psyc_0894  GTP-dependent nucleic acid-binding protein EngD  51.63 
 
 
363 aa  365  1e-100  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.943704 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  53.85 
 
 
387 aa  366  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2266  GTP-dependent nucleic acid-binding protein EngD  52.57 
 
 
367 aa  365  1e-100  Sinorhizobium medicae WSM419  Bacteria  normal  0.83049  normal  0.983976 
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  366  1e-100  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
NC_007969  Pcryo_1524  GTP-dependent nucleic acid-binding protein EngD  51.63 
 
 
363 aa  365  1e-100  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A2468  GTP-dependent nucleic acid-binding protein EngD  51.1 
 
 
363 aa  365  1e-100  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  53.42 
 
 
364 aa  366  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  365  1e-100  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000000959871  n/a   
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  366  1e-100  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
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