Gene Smed_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2266 
Symbol 
ID5323127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2343331 
End bp2344434 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID640791204 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001327933 
Protein GI150397466 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.83049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.983976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCA AATGCGGTAT CGTCGGGCTG CCGAATGTCG GCAAGTCCAC CCTCTTCAAC 
GCGCTGACCA AGACGGCGGC GGCGCAGGCG GCCAATTATC CTTTCTGCAC GATCGAGCCG
AACACCGGCG AAGTCGCCGT GCCCGACCCG CGCATGCGCA GGCTCGCAGA CATTGCCAAA
TCGAAAGAGA TCATTCCAAC CCGCATCTCC TTCGTCGATA TTGCCGGGCT GGTGCGCGGC
GCGTCCAAGG GTGAGGGCCT CGGCAACCAG TTCCTCGCCA ACATACGCGA GGTGGATGCA
GTCGTGCACG TATTGCGCTG CTTCGAGGAC GAAGACATCA CCCATGTCGA GGGCCGTATC
CATCCGGTCG AAGACGCCGA CACGATTGAG ACCGAGCTGA TGCTCGCCGA TCTGGAAAGC
CTCGAACGGC GTGCAGACCA GACGCGCAAG CGCGCGACCG GCAAGGACAA GGAATCGATG
GCGCAGCTTC CGATCATGGA AGCTTCCCTG AAGCTGCTGC AGGAAGGCAA GCCCGTCCGC
ACCCTGCTCT CCAGGCTCGA CGCCGATGAG CTGCGTATTC TGCAGAGTCT CAACCTGCTC
ACTTCGCACC CGGTTCTTTA CGTCTGCAAC GTCGCAGAAA GCGACGCCGC GACCGGAAAC
GAGCACACCC GCGCCGTCGA AAAGATGGCC CAAGAGCAAG GCGCCGAGAC GGTGATCATA
TCGGCTGCGA TCGAGTCCGA AGTGGCGCAG CTGCCGGAAG AGGAAGCTCA CGAATTTCTC
GCGGCGCTCG GCCTCGAAGA AGCGGGCCTC GATAGGCTGA TCCGCGCCGG CTACAAGCTC
CTCGATCTCA TCACCTATTT CACCGTCGGT CCGAAGGAGA CTCGCGCCTG GACCATCCCG
CGCGGCACCA AGGCCCCGCA GGCCGCCGGT GTCATCCACT CGGACTTCGA GCGTGGTTTC
ATTCGCGCCA ACACGATCGC CTATGACGAT TACATCGCCT ATGGCGGCGA AAACGGCGCG
AAGGAAGCCG GCAAGGCGCG GGATGAAGGC AAGGAATACG TCGTCCAGGA CGGCGACGTC
ATCCATTTCC GGTTCAACAC GTAA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKTAAAQA ANYPFCTIEP NTGEVAVPDP RMRRLADIAK 
SKEIIPTRIS FVDIAGLVRG ASKGEGLGNQ FLANIREVDA VVHVLRCFED EDITHVEGRI
HPVEDADTIE TELMLADLES LERRADQTRK RATGKDKESM AQLPIMEASL KLLQEGKPVR
TLLSRLDADE LRILQSLNLL TSHPVLYVCN VAESDAATGN EHTRAVEKMA QEQGAETVII
SAAIESEVAQ LPEEEAHEFL AALGLEEAGL DRLIRAGYKL LDLITYFTVG PKETRAWTIP
RGTKAPQAAG VIHSDFERGF IRANTIAYDD YIAYGGENGA KEAGKARDEG KEYVVQDGDV
IHFRFNT