| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0271 |
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| Symbol | |
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| ID | 6160541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 286128 |
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| End bp | 287222 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663015 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_001789311 |
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| Protein GI | 171056962 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.198016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA AGTGCGGCAT CGTGGGCCTG CCCAACGTCG GCAAGTCCAC CCTCTTCAAT
GCGCTGACCA AGGCCGGCAT CGCCGCCGAG AACTACCCGT TCTGCACCAT CGAGCCCAAC
GTGGGGGTGG TCGAGCTGCC CGATCCGCGC CTGCAAGGTC TGGCACAGAT CGTCCAGCCC
GAGCGCATCC TGCCGGCGAT CGTCGAATTC GTGGACATCG CCGGCCTGGT GGCCGGCGCC
TCGCAGGGTG AGGGCCTGGG CAACAAGTTC CTCAGCCACA TCCGCGAGAC CGACGCCATC
GTCAACGTGG TGCGCTGCTT CGAGGACGAC AACGTCATCC ACGTCGCCGG CAAGATCGAC
CCGATCTCCG ACATCGAGGT GATCCAGACC GAACTCTGCC TGGCCGACCT CGGCACGGTC
GAGAAGACGC TGCACCGCTC GCTCAAGGCG GCCCGCTCGG GCAACGACAA GGAAGCCGCC
GCGCTGGTCA AGGTGCTCGA GAAGTGCCAG GCCGCGCTCG ACCAGGCCCA GCCGGTGCGC
AGCCTCGACT TCAGCAAGGA AGAGCTGGTC ATCCTCAAGC CGCTGTGCCT GATCACCGCC
AAGCCGGCGA TGTTCGTCGG CAACGTCGAC GAGACCGGCT TCGAGAACAA CCCCTTCCTG
GATCGCCTGA AGGAGTTCGC CGCCAAGCAG AACGCGCCGG TGGTGGCGAT CTGCGCCAAG
ACCGAGGCCG AGCTGGCCGA GATGGAGGAC GACGACCGCG CGATGTTCCT GGCCGAGATG
GGCCAGGACG AGCCGGGCCT GAACCGCCTG ATCCGCGCCG CCTTCAAGCT GCTGGGCCTG
CAGACCTACT TCACCGCCGG GGTCAAGGAA GTGCGCGCCT GGACCATCCA CGTCGGCGAC
ACCGCGCCGC AGGCCGCGGG CGTGATCCAC ACCGATTTCG AGCGCGGCTT CATCCGCGCC
CAGACCATCG CCTATGACGA CTTCATCACC TTCAAGGGCG AGCAGGGCGC CAAGGACGCC
GGCAAGATGC GCGCCGAAGG CAAGGAGTAC GTCGTCAAGG ATGGCGACGT GCTGAACTTC
CTGTTCAACG TCTGA
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| Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVELPDPR LQGLAQIVQP
ERILPAIVEF VDIAGLVAGA SQGEGLGNKF LSHIRETDAI VNVVRCFEDD NVIHVAGKID
PISDIEVIQT ELCLADLGTV EKTLHRSLKA ARSGNDKEAA ALVKVLEKCQ AALDQAQPVR
SLDFSKEELV ILKPLCLITA KPAMFVGNVD ETGFENNPFL DRLKEFAAKQ NAPVVAICAK
TEAELAEMED DDRAMFLAEM GQDEPGLNRL IRAAFKLLGL QTYFTAGVKE VRAWTIHVGD
TAPQAAGVIH TDFERGFIRA QTIAYDDFIT FKGEQGAKDA GKMRAEGKEY VVKDGDVLNF
LFNV
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