Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0271 |
Symbol | |
ID | 6160541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 286128 |
End bp | 287222 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641663015 |
Product | GTP-binding protein YchF |
Protein accession | YP_001789311 |
Protein GI | 171056962 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.198016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCA AGTGCGGCAT CGTGGGCCTG CCCAACGTCG GCAAGTCCAC CCTCTTCAAT GCGCTGACCA AGGCCGGCAT CGCCGCCGAG AACTACCCGT TCTGCACCAT CGAGCCCAAC GTGGGGGTGG TCGAGCTGCC CGATCCGCGC CTGCAAGGTC TGGCACAGAT CGTCCAGCCC GAGCGCATCC TGCCGGCGAT CGTCGAATTC GTGGACATCG CCGGCCTGGT GGCCGGCGCC TCGCAGGGTG AGGGCCTGGG CAACAAGTTC CTCAGCCACA TCCGCGAGAC CGACGCCATC GTCAACGTGG TGCGCTGCTT CGAGGACGAC AACGTCATCC ACGTCGCCGG CAAGATCGAC CCGATCTCCG ACATCGAGGT GATCCAGACC GAACTCTGCC TGGCCGACCT CGGCACGGTC GAGAAGACGC TGCACCGCTC GCTCAAGGCG GCCCGCTCGG GCAACGACAA GGAAGCCGCC GCGCTGGTCA AGGTGCTCGA GAAGTGCCAG GCCGCGCTCG ACCAGGCCCA GCCGGTGCGC AGCCTCGACT TCAGCAAGGA AGAGCTGGTC ATCCTCAAGC CGCTGTGCCT GATCACCGCC AAGCCGGCGA TGTTCGTCGG CAACGTCGAC GAGACCGGCT TCGAGAACAA CCCCTTCCTG GATCGCCTGA AGGAGTTCGC CGCCAAGCAG AACGCGCCGG TGGTGGCGAT CTGCGCCAAG ACCGAGGCCG AGCTGGCCGA GATGGAGGAC GACGACCGCG CGATGTTCCT GGCCGAGATG GGCCAGGACG AGCCGGGCCT GAACCGCCTG ATCCGCGCCG CCTTCAAGCT GCTGGGCCTG CAGACCTACT TCACCGCCGG GGTCAAGGAA GTGCGCGCCT GGACCATCCA CGTCGGCGAC ACCGCGCCGC AGGCCGCGGG CGTGATCCAC ACCGATTTCG AGCGCGGCTT CATCCGCGCC CAGACCATCG CCTATGACGA CTTCATCACC TTCAAGGGCG AGCAGGGCGC CAAGGACGCC GGCAAGATGC GCGCCGAAGG CAAGGAGTAC GTCGTCAAGG ATGGCGACGT GCTGAACTTC CTGTTCAACG TCTGA
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Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVELPDPR LQGLAQIVQP ERILPAIVEF VDIAGLVAGA SQGEGLGNKF LSHIRETDAI VNVVRCFEDD NVIHVAGKID PISDIEVIQT ELCLADLGTV EKTLHRSLKA ARSGNDKEAA ALVKVLEKCQ AALDQAQPVR SLDFSKEELV ILKPLCLITA KPAMFVGNVD ETGFENNPFL DRLKEFAAKQ NAPVVAICAK TEAELAEMED DDRAMFLAEM GQDEPGLNRL IRAAFKLLGL QTYFTAGVKE VRAWTIHVGD TAPQAAGVIH TDFERGFIRA QTIAYDDFIT FKGEQGAKDA GKMRAEGKEY VVKDGDVLNF LFNV
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