Gene DvMF_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0234 
Symbol 
ID7172114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp260828 
End bp261928 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID643538729 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002434659 
Protein GI218885338 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0453052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCA GCATAGGCAT CGTCGGGCTG CCCAACGTGG GCAAGTCCAC CCTGTTCAAC 
GCGCTGACCA AGGCCCAGAA CGCCGAGGCG GCAAACTACC CCTTCTGCAC CATAGAACCC 
AACAAGGCCA CGGTGGCCGT GCCCGATGCG CGCATCGACA AGCTGACCGA AATGGCCAAG 
CCGCAGAAGA CCATCAGCGC CACGGTGGAC TTCATCGACA TTGCCGGGCT GGTGCGCGGG 
GCCAGCAAGG GCGAAGGCCT GGGCAACCAG TTTCTGGCCA ACATCCGCGA ATGCGCCGCC 
ATTCTTGAAG TGGTGCGCTG CTTCGACGAC GAGAACATCA CCCACGTGGA CGGGGCCATC 
GACCCCATCC GCGACATAGA GACCATAGAG ACCGAACTTC TGCTGGCCGA CATCCAGTCC 
GCCGAAAAGC GGTACGATCG CCTGTCCAAG ATGTCCAAGT TCGACAAGGA CGCAAAGGCC 
GCGTCCGACG AACTGGGCCG TCTGCTGGAA CACATGAACG CGGGTAACCC GGCCTCCACC 
TTTGAAGGCA AGGACAACGA CCTGTTCAAG CAGGCCATGC GCGAAATGGG CCTGATCACC 
GCCAAGAAGG TCATCTACTG CGCCAACGTG GACGAGGCCA ACCTGGACGG CACCAACGAC 
CATGTGCGCC GCGTGCGCGA ACTGGCCGAG CAGCGCGGCT GCGACATGGT GGTGATCTGC 
GCCAAGATCG AAGAAGAATT GCAGGGTCTT TCCGACGAGG AACAGGCCGA GATGCTGGCT 
TCTTACGGCA TCAAGGAAAG CGGCCTCGTC AGCATCATCC GCACCGGCTA CCACACGCTG 
GGCCTGGCCA GCTACTTTAC CGTGGGCGAA AAGGAAGTGC GCGCCTGGAC CATCCAGCAG 
GGCTGGAAGG CCCCGGCCTG CGCGGGCGTG ATCCACACCG ACTTCGAACG CGGCTTCATC 
CGGGCCGAAG TTATCGGCTA CGACGACTAC GTGAAGCACG GCACCGAGGC GGCCTGCCGG 
TCCGCCGGGG TGCTGCGCGT GGAAGGCAAG GAATACGTGA TGAAGGACGG CGACGTGGTC 
CACTTCCTGT TCAACGTGTA A
 
Protein sequence
MALSIGIVGL PNVGKSTLFN ALTKAQNAEA ANYPFCTIEP NKATVAVPDA RIDKLTEMAK 
PQKTISATVD FIDIAGLVRG ASKGEGLGNQ FLANIRECAA ILEVVRCFDD ENITHVDGAI 
DPIRDIETIE TELLLADIQS AEKRYDRLSK MSKFDKDAKA ASDELGRLLE HMNAGNPAST 
FEGKDNDLFK QAMREMGLIT AKKVIYCANV DEANLDGTND HVRRVRELAE QRGCDMVVIC 
AKIEEELQGL SDEEQAEMLA SYGIKESGLV SIIRTGYHTL GLASYFTVGE KEVRAWTIQQ 
GWKAPACAGV IHTDFERGFI RAEVIGYDDY VKHGTEAACR SAGVLRVEGK EYVMKDGDVV 
HFLFNV