Gene Ddes_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0946 
Symbol 
ID7284626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1103026 
End bp1104129 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID643581746 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002479531 
Protein GI220904219 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTCA GCATAGGTAT CGTCGGTCTG CCCAACGTGG GCAAGTCCAC TCTTTTCAAT 
GCCCTTACCA AGGCCCAGAA CGCCCAGGCC GCCAATTACC CCTTCTGCAC CATCGAGCCA 
AACAAGGCTA CGGTGGCCGT GCCGGACACG CGCCTGCAGG ATCTGACAAA CAAGGCAAAA 
CCACAAAAAA CCATCAACGC CAGTGTGGAT TTTATCGACA TTGCCGGTCT TGTGCGGGGA 
GCCAGTAAGG GTGAAGGCCT TGGTAACCAG TTTTTGGGCA ACATCCGCGA ATGCGCGGCC 
ATAGTTCATG TGGTACGCTG CTTTGAGGAT GAAAACATCA CCCACGTTGA CGGCGGCGTT 
GATCCCCTGC GTGATGTGGA CACCATTGAG ACGGAGCTTT TGCTGGCCGA CCTGCAAAGT 
GTTGAAAAAC GCCTTGAACG TCTGCAAAAG ATGTCCAAGG GCAACAAGGA CGCCAAGGCA 
GCTGCCGAAG TGATGCAGAC CCTGCAGACG CACCTGAATG ACGGCAAGGC CGCCCGCGAA 
TTTGCCCTGC CGGAAGGCAA CGAGGCCTTT CTGGCTTCGT GGCGTGAACT GGGTCTTCTG 
ACAGCCAAGC CCGTTATCTA CTGCGCTAAC GTGGATGAAA ACGCCGTGGC CGAGGGCAAC 
GCCTTTGTGG AAACCCTCAA AAACTTTGCT GCCGGGCGCA ACGCAGGCTT TGCCTGTATT 
TGCGCCAAGC TCGAAGAAGA ACTGCAGGGG TTGTCCGATG CCGAACAGGC CGAAATGCTT 
TCGTCGTACG GCATTACCGA AAGCGGCCTT GTGCGCATCA TCCGCACCGG CTACGAAACA 
CTGGGCCTTT GCAGCTACTT TACGGTCGGC CCCCAGGAAG TGCGGGCCTG GACCATTCAC 
AAGGGCTGGA AGGCCCCCCA GGCTGCCGGG GTCATTCATA CGGACTTTGA ACGCGGCTTC 
ATCCGTGCCG AGGTCATCTC TTACCAGGAC TACATGAGCC ACGAAAACGA GGCCGCCTGC 
CGCGCCAGCG GCGTGCTGCG TGTGGAAGGC AAAGAATATG TGGTCAAGGA TGGGGATGTC 
ATGCATTTTC TTTTCAACGT GTAG
 
Protein sequence
MALSIGIVGL PNVGKSTLFN ALTKAQNAQA ANYPFCTIEP NKATVAVPDT RLQDLTNKAK 
PQKTINASVD FIDIAGLVRG ASKGEGLGNQ FLGNIRECAA IVHVVRCFED ENITHVDGGV 
DPLRDVDTIE TELLLADLQS VEKRLERLQK MSKGNKDAKA AAEVMQTLQT HLNDGKAARE 
FALPEGNEAF LASWRELGLL TAKPVIYCAN VDENAVAEGN AFVETLKNFA AGRNAGFACI 
CAKLEEELQG LSDAEQAEML SSYGITESGL VRIIRTGYET LGLCSYFTVG PQEVRAWTIH 
KGWKAPQAAG VIHTDFERGF IRAEVISYQD YMSHENEAAC RASGVLRVEG KEYVVKDGDV 
MHFLFNV