Gene PHATRDRAFT_37067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37067 
Symbol 
ID7202223 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp96761 
End bp97925 
Gene Length1165 bp 
Protein Length363 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181298 
Protein GI219121906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC AGACGGCAAT TGTGGGTCTT CCCAATGTCG GAAAATCTAC TTTATTCAAC 
GCACTGACAG AAACTCAAGG TGCTGAAGCT GCCAATTATC CGTTCTGCAC CATAGAACCC
AATGTGAGTT TTGTTAGTCA AATTGAAACC TTGCCTGGCC CATTATGAAC CATCTGACTT
ATGTTTTGTG ACACAGGTGG GAATCGTAAG TGTACCTGAT CCCAAACTGG AAATCTTGAA
AGACATCAAC AAATCGGTAA AAGTTGTCCC AGCCGCATTG GAATTCGTTG ACGTCGCTGG
ACTAATCAAG GGTGCCTCTA CAGGTGAAGG CCTTGGCAAC CAGTTTCTGG CATCTATTAG
ACAGTGTGAC GCAGTTGTAC ACGTCGTTCG GTGCTTTGAA GACGAAGATG TTGTCCACGT
CGATGGAAGC ATTGATCCCG TTCGTGACGC CGAACTCATC AATCTTGAGT TGGCTCTAGC
CGACTTGTCT CAGGTCGAAA AGCGCTTAGA GCGCGTTCGA AAAGATCGAA ATGCCAGCCC
TGTTGAGAAG TCCGCATTAG AGAAGGTTGC CGCTGTCTTG CTGAAAGATC AACCTGCTCG
CAATGTTGTG TTGGACGAAG AGGAAGAAAA CGCTATTAAG TCTCTCGGTC TATTGACAGC
GAAAAAGATG GTGTACGCTG CCAATGTTGG CGATGCGGAT TTGGCAAACG GGAATGAGAT
GGTTGACAGA CTTCGTGAAA CTGCTGAGAA AGAGGGTGCA AAACTAGTTG TCGTATCGGC
TCAAGTCGAA GCGGAGCTTG TTGAACTAAG CGTCGGAGAC CGTACTGATT TTCTTGAATC
GCTGGGTGTC AAGCTAGAAG ACACTGGGCT TCGAAAACTT GTTCGTGAAG CTTACGATAT
CCTGGGATTA CAAACGTACT ACACCAGCGG CCCGACTGAG ACAAGAGCTT GGACTATCCG
CAAGGGATGG ACAGCACCGA AAGCTGCCGG CGTGATTCAT AACGATTTCG AGCGAGGTTT
CATCCGTGCA GAGACCGTTT CCTATGACGA TTTAGTTGCT TGTGGCAGCG AGATTGAAGC
GAAGAACAAA GGGAAGCTAC GCAGCGAGGG GAAAGACTAC ATTGTCCAAG AAGGAGATGT
GATCTTGTTT CGCTTCAACG TGTAA
 
Protein sequence
MKLQTAIVGL PNVGKSTLFN ALTETQGAEA ANYPFCTIEP NVGIVSVPDP KLEILKDINK 
SVKVVPAALE FVDVAGLIKG ASTGEGLGNQ FLASIRQCDA VVHVVRCFED EDVVHVDGSI
DPVRDAELIN LELALADLSQ VEKRLERVRK DRNASPVEKS ALEKVAAVLL KDQPARNVVL
DEEEENAIKS LGLLTAKKMV YAANVGDADL ANGNEMVDRL RETAEKEGAK LVVVSAQVEA
ELVELSVGDR TDFLESLGVK LEDTGLRKLV REAYDILGLQ TYYTSGPTET RAWTIRKGWT
APKAAGVIHN DFERGFIRAE TVSYDDLVAC GSEIEAKNKG KLRSEGKDYI VQEGDVILFR
FNV