More than 300 homologs were found in PanDaTox collection
for query gene Pcal_0244 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009376  Pars_1169  binding-protein-dependent transport systems inner membrane component  79.47 
 
 
602 aa  910    Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.0406993 
 
 
-
 
NC_009073  Pcal_0244  binding-protein-dependent transport systems inner membrane component  100 
 
 
600 aa  1166    Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.219645 
 
 
-
 
NC_010525  Tneu_1008  binding-protein-dependent transport systems inner membrane component  80.67 
 
 
600 aa  867    Thermoproteus neutrophilus V24Sta  Archaea  normal  decreased coverage  0.000236655 
 
 
-
 
NC_008701  Pisl_0076  binding-protein-dependent transport systems inner membrane component  81.47 
 
 
600 aa  967    Pyrobaculum islandicum DSM 4184  Archaea  normal  0.147749  normal 
 
 
-
 
NC_008698  Tpen_1807  binding-protein-dependent transport systems inner membrane component  39.42 
 
 
732 aa  323  4e-87  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_008688  Pden_4659  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
576 aa  191  4e-47  Paracoccus denitrificans PD1222  Bacteria  normal  0.57335  normal 
 
 
-
 
NC_010002  Daci_4800  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
579 aa  189  9e-47  Delftia acidovorans SPH-1  Bacteria  normal  0.236914  normal 
 
 
-
 
NC_010571  Oter_3589  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
564 aa  183  7e-45  Opitutus terrae PB90-1  Bacteria  normal  normal  0.108646 
 
 
-
 
NC_008554  Sfum_3497  binding-protein-dependent transport systems inner membrane component  26.34 
 
 
572 aa  181  2.9999999999999997e-44  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.699659 
 
 
-
 
NC_008698  Tpen_1487  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
544 aa  160  7e-38  Thermofilum pendens Hrk 5  Archaea  normal  0.0741111  n/a   
 
 
-
 
NC_009012  Cthe_1586  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
551 aa  150  7e-35  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3844  binding-protein-dependent transport systems inner membrane component  26.06 
 
 
741 aa  139  2e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.357299  n/a   
 
 
-
 
NC_012852  Rleg_6062  binding-protein-dependent transport systems inner membrane component  26.22 
 
 
740 aa  138  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.113948  normal 
 
 
-
 
NC_004311  BRA0719  ABC transporter, permease protein  25.13 
 
 
741 aa  135  1.9999999999999998e-30  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0675  ABC transporter, permease protein  25.13 
 
 
741 aa  135  3e-30  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3753  binding-protein-dependent transport systems inner membrane component  26.07 
 
 
742 aa  131  4.0000000000000003e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.151959  normal 
 
 
-
 
NC_009832  Spro_3116  binding-protein-dependent transport systems inner membrane component  26.16 
 
 
741 aa  124  4e-27  Serratia proteamaculans 568  Bacteria  normal  0.885166  normal 
 
 
-
 
NC_013515  Smon_0282  binding-protein-dependent transport systems inner membrane component  24.44 
 
 
569 aa  122  1.9999999999999998e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_04850  ABC-type Fe3+ transport system, permease component  29.07 
 
 
587 aa  122  1.9999999999999998e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1760  binding-protein-dependent transport systems inner membrane component  26.34 
 
 
743 aa  119  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.67824  normal  0.0216249 
 
 
-
 
NC_011769  DvMF_1588  binding-protein-dependent transport systems inner membrane component  24.41 
 
 
563 aa  118  3.9999999999999997e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_2994  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
579 aa  118  3.9999999999999997e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.434038  n/a   
 
 
-
 
NC_012791  Vapar_1098  binding-protein-dependent transport systems inner membrane component  27.48 
 
 
758 aa  110  6e-23  Variovorax paradoxus S110  Bacteria  normal  0.276526  n/a   
 
 
-
 
NC_009637  MmarC7_1108  binding-protein-dependent transport systems inner membrane component  25.72 
 
 
545 aa  109  1e-22  Methanococcus maripaludis C7  Archaea  normal  0.396425  normal 
 
 
-
 
NC_009135  MmarC5_1569  binding-protein-dependent transport systems inner membrane component  24.57 
 
 
545 aa  107  5e-22  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0334  binding-protein-dependent transport systems inner membrane component  24.9 
 
 
543 aa  106  9e-22  Methanococcus aeolicus Nankai-3  Archaea  normal  0.122368  n/a   
 
 
-
 
NC_007802  Jann_1364  binding-protein-dependent transport systems inner membrane component  25.53 
 
 
728 aa  105  2e-21  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2832  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
559 aa  103  1e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.628501  n/a   
 
 
-
 
NC_008309  HS_0640  Fe3+ ABC transporter, permease  24.23 
 
 
685 aa  101  5e-20  Haemophilus somnus 129PT  Bacteria  normal  0.0125154  n/a   
 
 
-
 
NC_010676  Bphyt_5677  binding-protein-dependent transport systems inner membrane component  25.84 
 
 
589 aa  100  6e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.35666  normal  0.522128 
 
 
-
 
NC_013203  Apar_0010  binding-protein-dependent transport systems inner membrane component  23.78 
 
 
569 aa  99.8  1e-19  Atopobium parvulum DSM 20469  Bacteria  normal  0.290045  normal 
 
 
-
 
NC_008346  Swol_2477  ABC-type transporter permease protein  26.56 
 
 
564 aa  100  1e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.174781  n/a   
 
 
-
 
NC_009483  Gura_1307  binding-protein-dependent transport systems inner membrane component  23.3 
 
 
557 aa  99  2e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1726  iron, putative  24.9 
 
 
585 aa  98.2  3e-19  Burkholderia thailandensis E264  Bacteria  normal  0.0368916  n/a   
 
 
-
 
NC_003295  RSc2938  putative transmembrane ABC transporter protein  25.09 
 
 
603 aa  98.2  4e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.880644  normal 
 
 
-
 
NC_007435  BURPS1710b_A2275  putative transmembrane ABC transporter protein  25.67 
 
 
589 aa  98.2  4e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1555  binding-protein-dependent transport systems inner membrane component  26 
 
 
561 aa  98.2  4e-19  Thermofilum pendens Hrk 5  Archaea  normal  0.488219  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0950  ABC transporter, permease protein  25.67 
 
 
589 aa  97.8  5e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.402794  n/a   
 
 
-
 
NC_009708  YpsIP31758_1259  ABC transporter, permease protein  26.27 
 
 
589 aa  97.4  6e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1376  binding-protein-dependent transport systems inner membrane component  26.27 
 
 
589 aa  97.4  6e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3146  ABC transporter permease  26.27 
 
 
589 aa  97.4  6e-19  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1035  ABC-type Fe3+ transport system, permease component  25.47 
 
 
589 aa  97.4  7e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3948  binding-protein-dependent transport systems inner membrane component  25.31 
 
 
589 aa  96.7  1e-18  Serratia proteamaculans 568  Bacteria  normal  0.648217  normal 
 
 
-
 
NC_009456  VC0395_0626  iron(III) ABC transporter, permease protein  24.33 
 
 
700 aa  96.7  1e-18  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1840  binding-protein-dependent transport systems inner membrane component  26.21 
 
 
561 aa  96.3  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4361  binding-protein-dependent transport systems inner membrane component  25.62 
 
 
590 aa  96.7  1e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4139  binding-protein-dependent transport systems inner membrane component  25.37 
 
 
590 aa  95.5  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167103  normal  0.195265 
 
 
-
 
NC_008688  Pden_4650  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
563 aa  95.9  2e-18  Paracoccus denitrificans PD1222  Bacteria  normal  0.859078  normal 
 
 
-
 
NC_010515  Bcenmc03_3274  binding-protein-dependent transport systems inner membrane component  25.58 
 
 
590 aa  95.1  3e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.312998  normal  0.625588 
 
 
-
 
NC_009436  Ent638_0832  binding-protein-dependent transport systems inner membrane component  24.18 
 
 
692 aa  94.7  4e-18  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1768  ABC Fe3+ siderophore transporter, inner membrane subunit  25.58 
 
 
590 aa  94.7  4e-18  Burkholderia sp. 383  Bacteria  normal  0.606838  normal  0.0413415 
 
 
-
 
NC_008061  Bcen_4123  binding-protein-dependent transport systems inner membrane component  26.15 
 
 
590 aa  94.7  4e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3665  binding-protein-dependent transport systems inner membrane component  25.37 
 
 
590 aa  94.7  4e-18  Burkholderia ambifaria AMMD  Bacteria  normal  0.447627  normal  0.577974 
 
 
-
 
NC_008543  Bcen2424_4243  binding-protein-dependent transport systems inner membrane component  26.15 
 
 
590 aa  94.7  4e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.297205  normal  0.0450564 
 
 
-
 
NC_013421  Pecwa_1771  binding-protein-dependent transport systems inner membrane component  23.8 
 
 
692 aa  94.7  5e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.715719  n/a   
 
 
-
 
NC_014210  Ndas_3481  binding-protein-dependent transport systems inner membrane component  24.58 
 
 
592 aa  94.4  5e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2486  binding-protein-dependent transport systems inner membrane component  24.44 
 
 
692 aa  94.4  5e-18  Dickeya dadantii Ech703  Bacteria  normal  0.516839  n/a   
 
 
-
 
NC_012917  PC1_1365  binding-protein-dependent transport systems inner membrane component  23.8 
 
 
692 aa  94  6e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1607  binding-protein-dependent transport systems inner membrane component  27.12 
 
 
609 aa  93.2  1e-17  Marinomonas sp. MWYL1  Bacteria  normal  0.900207  normal 
 
 
-
 
NC_014150  Bmur_0925  binding-protein-dependent transport systems inner membrane component  23.57 
 
 
554 aa  92.8  1e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2868  binding-protein-dependent transport systems inner membrane component  24.86 
 
 
603 aa  92.4  2e-17  Ralstonia pickettii 12D  Bacteria  normal  0.569333  normal  0.0423776 
 
 
-
 
NC_010682  Rpic_3215  binding-protein-dependent transport systems inner membrane component  24.68 
 
 
603 aa  92.4  2e-17  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0112  ABC transporter, permease protein  25.96 
 
 
597 aa  92  3e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1043  ABC transporter, fused inner membrane subunits  25.21 
 
 
589 aa  91.7  3e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.0498706  normal 
 
 
-
 
NC_012029  Hlac_2696  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
606 aa  92  3e-17  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_008228  Patl_1597  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
528 aa  90.9  5e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1992  binding-protein-dependent transport systems inner membrane component  25.89 
 
 
738 aa  90.9  6e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0456876  normal 
 
 
-
 
NC_013922  Nmag_0461  binding-protein-dependent transport systems inner membrane component  28.54 
 
 
663 aa  89.4  2e-16  Natrialba magadii ATCC 43099  Archaea  normal  0.745838  n/a   
 
 
-
 
NC_011831  Cagg_2417  binding-protein-dependent transport systems inner membrane component  26.72 
 
 
536 aa  88.6  3e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0253396  normal  0.609444 
 
 
-
 
NC_009429  Rsph17025_3160  hypothetical protein  25 
 
 
572 aa  87  0.000000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0731  binding-protein dependent transport system inner membrane protein  25.15 
 
 
567 aa  85.5  0.000000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0677887  n/a   
 
 
-
 
NC_008688  Pden_4912  binding-protein-dependent transport systems inner membrane component  24.87 
 
 
547 aa  85.5  0.000000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.341081  normal  0.198477 
 
 
-
 
NC_010524  Lcho_4318  binding-protein-dependent transport systems inner membrane component  25.22 
 
 
615 aa  86.3  0.000000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.242541 
 
 
-
 
NC_010551  BamMC406_1092  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
558 aa  85.5  0.000000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4696  binding-protein-dependent transport systems inner membrane component  28.34 
 
 
568 aa  85.1  0.000000000000003  Polaromonas sp. JS666  Bacteria  normal  normal  0.832817 
 
 
-
 
NC_009972  Haur_2266  binding-protein-dependent transport systems inner membrane component  24.2 
 
 
575 aa  85.5  0.000000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0329  2-aminoethylphosphonate ABC transport system, permease protein  28.3 
 
 
574 aa  84.7  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  normal  0.90369 
 
 
-
 
NC_007510  Bcep18194_A4317  ABC spermidine/putrescine transporter, inner membrane subunit  27.7 
 
 
562 aa  83.6  0.000000000000009  Burkholderia sp. 383  Bacteria  normal  0.946485  normal  0.426161 
 
 
-
 
NC_010172  Mext_0571  binding-protein-dependent transport systems inner membrane component  27 
 
 
550 aa  83.2  0.00000000000001  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4535  binding-protein-dependent transport systems inner membrane component  24.89 
 
 
579 aa  83.2  0.00000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0580  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
550 aa  82.4  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1543  binding-protein-dependent transport systems inner membrane component  23.68 
 
 
550 aa  81.6  0.00000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.264316  n/a   
 
 
-
 
NC_008740  Maqu_1091  binding-protein-dependent transport systems inner membrane component  24.63 
 
 
562 aa  81.3  0.00000000000005  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00794358  n/a   
 
 
-
 
NC_008752  Aave_3889  binding-protein-dependent transport systems inner membrane component  26.37 
 
 
551 aa  80.9  0.00000000000006  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2276  binding-protein-dependent transport systems inner membrane component  26.22 
 
 
541 aa  80.1  0.00000000000009  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_011353  ECH74115_0434  ABC transporter, permease protein  23.14 
 
 
692 aa  79.3  0.0000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_6022  binding-protein-dependent transport systems inner membrane component  25.16 
 
 
558 aa  79.3  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.39431  normal 
 
 
-
 
NC_013421  Pecwa_2919  binding-protein-dependent transport systems inner membrane component  23.48 
 
 
550 aa  79  0.0000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5050  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
262 aa  78.6  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009040  Rsph17029_4170  molybdate ABC transporter permease protein  34.13 
 
 
232 aa  77.8  0.0000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  hitchhiker  0.000814029  normal  0.102728 
 
 
-
 
NC_008390  Bamb_1092  binding-protein-dependent transport systems inner membrane component  28.02 
 
 
558 aa  77.8  0.0000000000005  Burkholderia ambifaria AMMD  Bacteria  normal  0.867638  n/a   
 
 
-
 
NC_007802  Jann_2469  molybdate ABC transporter permease protein  34.76 
 
 
233 aa  77  0.0000000000009  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0195657 
 
 
-
 
NC_010001  Cphy_2143  binding-protein-dependent transport systems inner membrane component  23.58 
 
 
608 aa  77  0.0000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4827  binding-protein-dependent transport systems inner membrane component  25.32 
 
 
534 aa  77  0.0000000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232577  normal  0.0312056 
 
 
-
 
NC_009049  Rsph17029_1646  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
295 aa  76.3  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.257053  normal  0.557332 
 
 
-
 
NC_007493  RSP_0017  ABC spermidine/putrescine transporter, inner membrane subunit  35.71 
 
 
295 aa  76.3  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2021  binding-protein-dependent transport systems inner membrane component  25.78 
 
 
522 aa  75.9  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  0.0398286  n/a   
 
 
-
 
NC_007952  Bxe_B1836  ABC Fe+3 transporter, inner membrane subunit  24.14 
 
 
534 aa  75.5  0.000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.374127  normal  0.533271 
 
 
-
 
NC_009972  Haur_3445  binding-protein-dependent transport systems inner membrane component  25.59 
 
 
564 aa  75.5  0.000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.957532  n/a   
 
 
-
 
NC_013595  Sros_5569  binding-protein-dependent transport systems inner membrane component  26.84 
 
 
608 aa  75.5  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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