Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2477 |
Symbol | |
ID | 4282641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2809738 |
End bp | 2811432 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638139362 |
Product | ABC-type transporter permease protein |
Protein accession | YP_755137 |
Protein GI | 114567983 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.174781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCA GGCAAAGTTT TATATTCAAG CTTTTTTATA TATTGATATC GCTTACTATC ATCTATTTCG TACTATTGCC CATAGTAAGT GTGTTTGTTT ATGGACTGTT ATCGGGCAGC GGTACTGATT TGTCCAATCA AATACTACCA CGGATATGGA AATATATGAA GAATAGCCTG CAGGTGGCCT TGTTTGTAAC GGTAATTGCG ACTTCATTCG GTCTGCTGGC ATCTATTACT TTATGGCGCG TGAATTTCTG GGGCCGTAAG CTGATGCAGG TATTAGTGCT TATGCCCTTG ATCAGCCCGC CCTTTGTAGG AACGGTGGCC TTTATCATGT TATTTGGCAA AAGGGGCCTT ATTACTCATT CACTCCTGGG CCTGGAGATT AGCCCCTATG GGTTCCATGG GATTGTAACC ATGCAATCCA TCGGACTGGC TACTTTGGCT TATTTGCTTA TATCCAGTGC AATCAGGAAA ACGGATGTTT CCCCGGAAGA AGCTGCAAGG AATCTGGGGG CACCGGAAAA GAAGGTTTTT TTGACTATAA CCTTGCCGTT AATGATACCT GAAATAACCG TAGCAGCCAT GCTGGTTTTT TTGACTTCAA TGGCGGATTT TGCAACGCCG ATAATTATTG GGGGCGCCTA CCAAACTCTG GCCTCGGATT TATATATTCA GATTACCGGC TTGTATAATG TGCAGATGGC TTCAATTACC GGCATCTTTC TCTTTATTCC CTGTTTTGCC GCTTTTTTTA TTCAGCGTCA TTATTCCGGT AAAAATCTGG TCTACAGCCA GTACGTTTCT CCTGAAAGGA TCGAATACCA GCAGGTGAAA CCGGTTGTGA AATTCATGCT GATCGGATTA AGCAGTCTGT TTGTTATATT TGTGGTTTTT CAATATGCAT TTATTGTTAT AGGTGCATTT ACCGAACATT GGGGCTACAA TTATGCCTTT AGCCTGCGGC ATTTGGAGAA TATTCTAAGC AAAAACCTGG CTTCATTTGT TAATAGTGTT AAATTGGCGG TTACAGTCGG TTTTATTTCC TCTTTGTTGG GAGTTTTGCT GGCTTATATT ATAAAAACGA AGGATTATCC CCTGACCAGG CAGCTCGATT TGGTGGTAAC TTTACCGGCT GCTACGCCAG GAATACTGCT GGGTATCGGT TATCTGGTGA CTTTCAGATA TCCCCTGCTG GGTATCGGCA AATATGTTTT ACCCGGCTTT GAACCGGTAA TTCTGCTTGG TACCGGCATT ATAATTTATT TAATTTGTAT TTACCGCTAC ATATATATTG GGATGAAAGC AGGCTACGCT TTGATGGAAC ATGTAAATCC CAATCTGGAA CTGGCCGCGA TTAATCTGGG CGCGAGTGAG CGCAGAGTCT TTTTCGATAT CATGTTCCCC CTGCTGAAAC CGGCATTTAA TGCCGCCTTT TTGAAAAATT TCACTTCCAC CATGACAACA TTGGGGGCAA TCGTTTTTTT GTTATTGCCC AAGAATAAAG TAGCGGTGCA GCAAATCTTT CAAATAATGA CCAGCAGTGA AATCGGTGCA GCCGCCATGA TGGCCTTATT GCTTTCATTG CTGTCACTTG TTTTCCTGGC TGCATTTCAA CTGCTCCTTA ATTATGAAGA GATATTCAAA CGTTTAAGGG AGGGCCGGCA ATGGGTATCG AGCTTAAGGA AATAA
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Protein sequence | MQSRQSFIFK LFYILISLTI IYFVLLPIVS VFVYGLLSGS GTDLSNQILP RIWKYMKNSL QVALFVTVIA TSFGLLASIT LWRVNFWGRK LMQVLVLMPL ISPPFVGTVA FIMLFGKRGL ITHSLLGLEI SPYGFHGIVT MQSIGLATLA YLLISSAIRK TDVSPEEAAR NLGAPEKKVF LTITLPLMIP EITVAAMLVF LTSMADFATP IIIGGAYQTL ASDLYIQITG LYNVQMASIT GIFLFIPCFA AFFIQRHYSG KNLVYSQYVS PERIEYQQVK PVVKFMLIGL SSLFVIFVVF QYAFIVIGAF TEHWGYNYAF SLRHLENILS KNLASFVNSV KLAVTVGFIS SLLGVLLAYI IKTKDYPLTR QLDLVVTLPA ATPGILLGIG YLVTFRYPLL GIGKYVLPGF EPVILLGTGI IIYLICIYRY IYIGMKAGYA LMEHVNPNLE LAAINLGASE RRVFFDIMFP LLKPAFNAAF LKNFTSTMTT LGAIVFLLLP KNKVAVQQIF QIMTSSEIGA AAMMALLLSL LSLVFLAAFQ LLLNYEEIFK RLREGRQWVS SLRK
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