Gene Swol_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2477 
Symbol 
ID4282641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2809738 
End bp2811432 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content43% 
IMG OID638139362 
ProductABC-type transporter permease protein 
Protein accessionYP_755137 
Protein GI114567983 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCA GGCAAAGTTT TATATTCAAG CTTTTTTATA TATTGATATC GCTTACTATC 
ATCTATTTCG TACTATTGCC CATAGTAAGT GTGTTTGTTT ATGGACTGTT ATCGGGCAGC
GGTACTGATT TGTCCAATCA AATACTACCA CGGATATGGA AATATATGAA GAATAGCCTG
CAGGTGGCCT TGTTTGTAAC GGTAATTGCG ACTTCATTCG GTCTGCTGGC ATCTATTACT
TTATGGCGCG TGAATTTCTG GGGCCGTAAG CTGATGCAGG TATTAGTGCT TATGCCCTTG
ATCAGCCCGC CCTTTGTAGG AACGGTGGCC TTTATCATGT TATTTGGCAA AAGGGGCCTT
ATTACTCATT CACTCCTGGG CCTGGAGATT AGCCCCTATG GGTTCCATGG GATTGTAACC
ATGCAATCCA TCGGACTGGC TACTTTGGCT TATTTGCTTA TATCCAGTGC AATCAGGAAA
ACGGATGTTT CCCCGGAAGA AGCTGCAAGG AATCTGGGGG CACCGGAAAA GAAGGTTTTT
TTGACTATAA CCTTGCCGTT AATGATACCT GAAATAACCG TAGCAGCCAT GCTGGTTTTT
TTGACTTCAA TGGCGGATTT TGCAACGCCG ATAATTATTG GGGGCGCCTA CCAAACTCTG
GCCTCGGATT TATATATTCA GATTACCGGC TTGTATAATG TGCAGATGGC TTCAATTACC
GGCATCTTTC TCTTTATTCC CTGTTTTGCC GCTTTTTTTA TTCAGCGTCA TTATTCCGGT
AAAAATCTGG TCTACAGCCA GTACGTTTCT CCTGAAAGGA TCGAATACCA GCAGGTGAAA
CCGGTTGTGA AATTCATGCT GATCGGATTA AGCAGTCTGT TTGTTATATT TGTGGTTTTT
CAATATGCAT TTATTGTTAT AGGTGCATTT ACCGAACATT GGGGCTACAA TTATGCCTTT
AGCCTGCGGC ATTTGGAGAA TATTCTAAGC AAAAACCTGG CTTCATTTGT TAATAGTGTT
AAATTGGCGG TTACAGTCGG TTTTATTTCC TCTTTGTTGG GAGTTTTGCT GGCTTATATT
ATAAAAACGA AGGATTATCC CCTGACCAGG CAGCTCGATT TGGTGGTAAC TTTACCGGCT
GCTACGCCAG GAATACTGCT GGGTATCGGT TATCTGGTGA CTTTCAGATA TCCCCTGCTG
GGTATCGGCA AATATGTTTT ACCCGGCTTT GAACCGGTAA TTCTGCTTGG TACCGGCATT
ATAATTTATT TAATTTGTAT TTACCGCTAC ATATATATTG GGATGAAAGC AGGCTACGCT
TTGATGGAAC ATGTAAATCC CAATCTGGAA CTGGCCGCGA TTAATCTGGG CGCGAGTGAG
CGCAGAGTCT TTTTCGATAT CATGTTCCCC CTGCTGAAAC CGGCATTTAA TGCCGCCTTT
TTGAAAAATT TCACTTCCAC CATGACAACA TTGGGGGCAA TCGTTTTTTT GTTATTGCCC
AAGAATAAAG TAGCGGTGCA GCAAATCTTT CAAATAATGA CCAGCAGTGA AATCGGTGCA
GCCGCCATGA TGGCCTTATT GCTTTCATTG CTGTCACTTG TTTTCCTGGC TGCATTTCAA
CTGCTCCTTA ATTATGAAGA GATATTCAAA CGTTTAAGGG AGGGCCGGCA ATGGGTATCG
AGCTTAAGGA AATAA
 
Protein sequence
MQSRQSFIFK LFYILISLTI IYFVLLPIVS VFVYGLLSGS GTDLSNQILP RIWKYMKNSL 
QVALFVTVIA TSFGLLASIT LWRVNFWGRK LMQVLVLMPL ISPPFVGTVA FIMLFGKRGL
ITHSLLGLEI SPYGFHGIVT MQSIGLATLA YLLISSAIRK TDVSPEEAAR NLGAPEKKVF
LTITLPLMIP EITVAAMLVF LTSMADFATP IIIGGAYQTL ASDLYIQITG LYNVQMASIT
GIFLFIPCFA AFFIQRHYSG KNLVYSQYVS PERIEYQQVK PVVKFMLIGL SSLFVIFVVF
QYAFIVIGAF TEHWGYNYAF SLRHLENILS KNLASFVNSV KLAVTVGFIS SLLGVLLAYI
IKTKDYPLTR QLDLVVTLPA ATPGILLGIG YLVTFRYPLL GIGKYVLPGF EPVILLGTGI
IIYLICIYRY IYIGMKAGYA LMEHVNPNLE LAAINLGASE RRVFFDIMFP LLKPAFNAAF
LKNFTSTMTT LGAIVFLLLP KNKVAVQQIF QIMTSSEIGA AAMMALLLSL LSLVFLAAFQ
LLLNYEEIFK RLREGRQWVS SLRK