Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3948 |
Symbol | |
ID | 5603759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4373327 |
End bp | 4375096 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640939508 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001480171 |
Protein GI | 157372182 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.648217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAT GGCGCAGAAA GTGGCAAAGC CTGCCGCGCG GCTTGGTGGT ATTGATAACC GCACTGGTTA TCTACGTGCC GCTGTCGTTT ATCGTGATTC AAAGTTTCCT CTCCGCTCCC TTTTTCTCCC CCTCCAAGGT GTTCAGCCTG GAGGCGTTCC AGTTTATTTT TACCGATCCG GACTTCTACA AGGCGCTGAA AAGCGGATTT ATTCTGGCTT TCGGCCTGGT GGTGATCGCC ATTCCGCTGG GGGGCATTCT GGCCTTTTTG ATGGTCAGAA CCGACTTGCC CGGTCGGCGC TTTATTGAAC CGCTGATCCT GGTGCCAATC TTTGTCTCGC CGATGGTCTT GGGTTTTGGC TACGTGGTGG CCGCCGGGCC GGTGGGCTTC TTCTCGCTGT GGGCGGAATC GCTGCTGGGG TTCGTACCCT GGAATATCTA TTCGATGGCC AGCATCGTGG TGATCGCCGG ACTGACGCAC GTGCCACACG CCTATCTTTA TATTTCCTCG GCCTTGCGCA GCGTCGGTTC CGACGTGGAG GAAGCCGCAC GCACGGCGGG TGCCTCGCCT TTGCAGGTGA TGACTGCCGT TAGCTTGCCG ATGGTGCGAC CGTCCATTTT GTACGCTGGG GTACTGCTGT TTTTCCTTGG GCTGGAAGTG TTTGGCCTGA TGTTGGTGCT GGGCGATCCG GAAGGCAACC TGGTGCTGGC GACTTACCTG TATCAACTGA CCAATAAGCT GGGCACGCCG TCTTACCATC TGATGGCGGC GGTGGCGGTG GTGCTGATCT GCATCACCAT TCCGTTGGTG ATGTTGCAAC GCCGTCTGAT GCGCACCGCT AACCGCTTCG TTACCGTCAA GGGCAAGGCG TCGCAGGCGC GGGCGCTGCC GCTGGGGAAA TGGCGTTGGA TCGCCGGTGC GGTGGTGGTG TTCTGGCTGA CGGTGACCAT CGGCGTACCG CTGGTGGGGG TGGTGCTGCG CGCCTTTATT TCCAACTGGG GTGTGGGTGT TTCCATTTGG GACGAACTGT CGCTCAACAC TTTCCGTACC ATCTGGCAGC AACCCAACCT GCTGCGGGCG ATCGTCAACT CGATGGCGAT TGGGGTATTC GGCGGTGCGC TGGCGGTGGT TTGTTACCTG TTTATCGGCA TTGCCATGCA CCGCAAACCC GACGGGGCTA CCCGTTTCCT CGATTACAGC GTGCTGGTGC CACGAGCGGT GCCGGGTCTG CTGGCGGGGC TGGCGTTCCT GTGGGTGTTT CTGTTCCTGC CGATGTGGCT GGACAAGTCA TTGAAAGAAG GCTGGCTGTC GGCGCTGCCG GTGGCCGAGT GGCTGCGGGA GAACCTGATC GTCTGGCTGC GTTCCTTGCG CAGCACCATC TTCAGCGTCT GGCTGGCGTA CACCGTGGTG TGGATGGCCT ATGGCCTGCG GCTGATCTCT TCGACGCTGC TGCAGGTCGG CCCAGAGCTG GAGGAGGCGG CGCGCAGTGC CGGCGCGACC CGGGGGCAGA TCACCCGTCA CGTCACCATT CCGCTGTCGC GCTACGGCCT GATTGGTTCG TGGCTGCTGA TGTTCCTGAT TTTCGAACGT GAGTATTCCA CCGGGGTGTA TCTGTTGTCT CCGGGTACCG AAACCATAGG TTCGATGCTG GTTTCCCTGT GGGCGGCGGG CGCCATCGAT ATCGTTGCGG CACTCTCGTT CATTAACATC CTGCTGGTGG TGTTGGGGCT GGGTATTGCC CTGCGCTTTG GAGTGAAATT ACATGATTGA
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Protein sequence | MEAWRRKWQS LPRGLVVLIT ALVIYVPLSF IVIQSFLSAP FFSPSKVFSL EAFQFIFTDP DFYKALKSGF ILAFGLVVIA IPLGGILAFL MVRTDLPGRR FIEPLILVPI FVSPMVLGFG YVVAAGPVGF FSLWAESLLG FVPWNIYSMA SIVVIAGLTH VPHAYLYISS ALRSVGSDVE EAARTAGASP LQVMTAVSLP MVRPSILYAG VLLFFLGLEV FGLMLVLGDP EGNLVLATYL YQLTNKLGTP SYHLMAAVAV VLICITIPLV MLQRRLMRTA NRFVTVKGKA SQARALPLGK WRWIAGAVVV FWLTVTIGVP LVGVVLRAFI SNWGVGVSIW DELSLNTFRT IWQQPNLLRA IVNSMAIGVF GGALAVVCYL FIGIAMHRKP DGATRFLDYS VLVPRAVPGL LAGLAFLWVF LFLPMWLDKS LKEGWLSALP VAEWLRENLI VWLRSLRSTI FSVWLAYTVV WMAYGLRLIS STLLQVGPEL EEAARSAGAT RGQITRHVTI PLSRYGLIGS WLLMFLIFER EYSTGVYLLS PGTETIGSML VSLWAAGAID IVAALSFINI LLVVLGLGIA LRFGVKLHD
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