Gene Spro_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3948 
Symbol 
ID5603759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4373327 
End bp4375096 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content60% 
IMG OID640939508 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001480171 
Protein GI157372182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.648217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAT GGCGCAGAAA GTGGCAAAGC CTGCCGCGCG GCTTGGTGGT ATTGATAACC 
GCACTGGTTA TCTACGTGCC GCTGTCGTTT ATCGTGATTC AAAGTTTCCT CTCCGCTCCC
TTTTTCTCCC CCTCCAAGGT GTTCAGCCTG GAGGCGTTCC AGTTTATTTT TACCGATCCG
GACTTCTACA AGGCGCTGAA AAGCGGATTT ATTCTGGCTT TCGGCCTGGT GGTGATCGCC
ATTCCGCTGG GGGGCATTCT GGCCTTTTTG ATGGTCAGAA CCGACTTGCC CGGTCGGCGC
TTTATTGAAC CGCTGATCCT GGTGCCAATC TTTGTCTCGC CGATGGTCTT GGGTTTTGGC
TACGTGGTGG CCGCCGGGCC GGTGGGCTTC TTCTCGCTGT GGGCGGAATC GCTGCTGGGG
TTCGTACCCT GGAATATCTA TTCGATGGCC AGCATCGTGG TGATCGCCGG ACTGACGCAC
GTGCCACACG CCTATCTTTA TATTTCCTCG GCCTTGCGCA GCGTCGGTTC CGACGTGGAG
GAAGCCGCAC GCACGGCGGG TGCCTCGCCT TTGCAGGTGA TGACTGCCGT TAGCTTGCCG
ATGGTGCGAC CGTCCATTTT GTACGCTGGG GTACTGCTGT TTTTCCTTGG GCTGGAAGTG
TTTGGCCTGA TGTTGGTGCT GGGCGATCCG GAAGGCAACC TGGTGCTGGC GACTTACCTG
TATCAACTGA CCAATAAGCT GGGCACGCCG TCTTACCATC TGATGGCGGC GGTGGCGGTG
GTGCTGATCT GCATCACCAT TCCGTTGGTG ATGTTGCAAC GCCGTCTGAT GCGCACCGCT
AACCGCTTCG TTACCGTCAA GGGCAAGGCG TCGCAGGCGC GGGCGCTGCC GCTGGGGAAA
TGGCGTTGGA TCGCCGGTGC GGTGGTGGTG TTCTGGCTGA CGGTGACCAT CGGCGTACCG
CTGGTGGGGG TGGTGCTGCG CGCCTTTATT TCCAACTGGG GTGTGGGTGT TTCCATTTGG
GACGAACTGT CGCTCAACAC TTTCCGTACC ATCTGGCAGC AACCCAACCT GCTGCGGGCG
ATCGTCAACT CGATGGCGAT TGGGGTATTC GGCGGTGCGC TGGCGGTGGT TTGTTACCTG
TTTATCGGCA TTGCCATGCA CCGCAAACCC GACGGGGCTA CCCGTTTCCT CGATTACAGC
GTGCTGGTGC CACGAGCGGT GCCGGGTCTG CTGGCGGGGC TGGCGTTCCT GTGGGTGTTT
CTGTTCCTGC CGATGTGGCT GGACAAGTCA TTGAAAGAAG GCTGGCTGTC GGCGCTGCCG
GTGGCCGAGT GGCTGCGGGA GAACCTGATC GTCTGGCTGC GTTCCTTGCG CAGCACCATC
TTCAGCGTCT GGCTGGCGTA CACCGTGGTG TGGATGGCCT ATGGCCTGCG GCTGATCTCT
TCGACGCTGC TGCAGGTCGG CCCAGAGCTG GAGGAGGCGG CGCGCAGTGC CGGCGCGACC
CGGGGGCAGA TCACCCGTCA CGTCACCATT CCGCTGTCGC GCTACGGCCT GATTGGTTCG
TGGCTGCTGA TGTTCCTGAT TTTCGAACGT GAGTATTCCA CCGGGGTGTA TCTGTTGTCT
CCGGGTACCG AAACCATAGG TTCGATGCTG GTTTCCCTGT GGGCGGCGGG CGCCATCGAT
ATCGTTGCGG CACTCTCGTT CATTAACATC CTGCTGGTGG TGTTGGGGCT GGGTATTGCC
CTGCGCTTTG GAGTGAAATT ACATGATTGA
 
Protein sequence
MEAWRRKWQS LPRGLVVLIT ALVIYVPLSF IVIQSFLSAP FFSPSKVFSL EAFQFIFTDP 
DFYKALKSGF ILAFGLVVIA IPLGGILAFL MVRTDLPGRR FIEPLILVPI FVSPMVLGFG
YVVAAGPVGF FSLWAESLLG FVPWNIYSMA SIVVIAGLTH VPHAYLYISS ALRSVGSDVE
EAARTAGASP LQVMTAVSLP MVRPSILYAG VLLFFLGLEV FGLMLVLGDP EGNLVLATYL
YQLTNKLGTP SYHLMAAVAV VLICITIPLV MLQRRLMRTA NRFVTVKGKA SQARALPLGK
WRWIAGAVVV FWLTVTIGVP LVGVVLRAFI SNWGVGVSIW DELSLNTFRT IWQQPNLLRA
IVNSMAIGVF GGALAVVCYL FIGIAMHRKP DGATRFLDYS VLVPRAVPGL LAGLAFLWVF
LFLPMWLDKS LKEGWLSALP VAEWLRENLI VWLRSLRSTI FSVWLAYTVV WMAYGLRLIS
STLLQVGPEL EEAARSAGAT RGQITRHVTI PLSRYGLIGS WLLMFLIFER EYSTGVYLLS
PGTETIGSML VSLWAAGAID IVAALSFINI LLVVLGLGIA LRFGVKLHD