| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1840 |
|---|
| Symbol | |
|---|
| ID | 8377512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2097300 |
|---|
| End bp | 2098985 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645001068 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003158347 |
|---|
| Protein GI | 256829619 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA ATCGATCGAA ACTGACGTTT TCCCTGATTC TCATTGTGGG AGTATTGACC
GTCTGTCCCG TGGTCATGCT CGTCATCGGC AGTTTTTCCG AAGGCCTGAC CGCTTTCGGA
AGCTTCACCC TGCAGAAATA TGTCGAGGCC TACACCGATC CGGCTCTGGC AGAAATCATC
CTCAACACCG TGATTTTCGT TCTGGGCTCG TCGACCCTGG CCACGGTCTT GGCCCTGTTT
CTGTCGTATC TGAACAACCG CACGGACATT CCCTGCAAGT TCATGTTCCG GATCATCTCC
ATCATTCCCA TGATGATTCC GCACATTCTC TTTTCCGTGA GCTGGGCGCT GCTCTTGAAC
CCTTCCAACG GGCTCATCAA CCTGGTGCTC AAGCAGGTCT TTTTTCTCGA TCATGCGCCG
CTCAACATCT ATTCCCTGTG GGGCATGATT CTGGTCGAGG GCCTGCTCGA CCTGCCCATC
GCCTATCTCA TCATCGCCCC GGCCATGGCT TCCTTCGACG TGGCCCTGGA AGAGTCATCC
AAGGTTTGCG GGGCCAGCCC CTTGAGAACC CTTTTTCGCG TCACCCTGCC GGTGCTTCGT
CCGGCCATCC TGGCCGCGTT CATCCTGGGC GTGGTGCGCA GCCTGGCTTC CTTCGCCGTG
CCGTCGGTCA TCGGCATGCC CGGCCGGGTC TACGTCCTGG CCACCCATCT GTACCAGATG
ATCGCCACGG GGTTTTCCGT GGACTACGGC AAGGCGGCGG CCATCGGCAT GAGCGTTCTG
GCCGCGTCCG TCACGCTCAT CCTGGTTTAT CGGGCATTGA CGAGCGAGAG TGAAAAATAT
GTGACCATTT CCAGCCGGGG CTACCGGCCC ACGGTCATTC CCCTCAAGGG AGCGCGGATT
CCCCTCTTCG CCGTGGTGGC CCTGCTTTCG TTCGTGCTCA TCGTCCTGCC GGTGGTGGTG
CTCTTCTATA CGTCCCTGGT CCCGTACTCC ATGGTTCCCA GCGCCCGCGC CTTTTCGCTT
ATGAGCTGGA AGCATTGGAT CGAGGTCCTC AAAGATCCCA TCTCCCTGCT GTCGCTCAAG
AACAGCCTGA TGCTCGGGCT TGGAGGAGCC ACGCTGGGAG TGATCCTTTC GGTCTTCGTG
GCCTACACCA TCGTCAAGGT CCGGACCCGG GCCGCCGGCA TCCTTGAATC GCTCAGTTTT
CTGTCCTTTT CCTTTCCCGG CATCGTCATC GGCATGGGGT TCATGTGGTT TTTCGTGCGC
ACTCCGCTCT ATGCCACCAT CTGGGCGCTG CTCATCGGCT ACATCGCCAC CTATCTGCCT
TACGGCATCC GGCCCCTGGC CAGCGCCTTC GTCCAGGTGC ACAGCCATCT GGAGGAATCG
TCCCTGGTCT GCGGTGCCAG CCGCATGACG ACCATGCGCC GCATCATCAT TCCGTTGCTG
GTGCCGGGCA TGGTTTCGGG GTGGATTCTC ATGGCTACGA TGTTTGTGCG CGAACTGACC
CTCTCGGTGG TGCTGTCCCG CCCCGGCACG GAGGTGCTGG CCGTGCAGAT CCTGCGGTTC
GCCGAGGACG GCCTGTGGGG CAGGCTTTCG GCCCTGGGGA TCATGATGAT ATTCATCTCC
ACGATCCTGG TGATCCTGGC CAATCTGGTC GGGGCCAGAT TCAAGCCAAT GGAGGGCGGG
GGATAG
|
|---|
| Protein sequence | MDANRSKLTF SLILIVGVLT VCPVVMLVIG SFSEGLTAFG SFTLQKYVEA YTDPALAEII
LNTVIFVLGS STLATVLALF LSYLNNRTDI PCKFMFRIIS IIPMMIPHIL FSVSWALLLN
PSNGLINLVL KQVFFLDHAP LNIYSLWGMI LVEGLLDLPI AYLIIAPAMA SFDVALEESS
KVCGASPLRT LFRVTLPVLR PAILAAFILG VVRSLASFAV PSVIGMPGRV YVLATHLYQM
IATGFSVDYG KAAAIGMSVL AASVTLILVY RALTSESEKY VTISSRGYRP TVIPLKGARI
PLFAVVALLS FVLIVLPVVV LFYTSLVPYS MVPSARAFSL MSWKHWIEVL KDPISLLSLK
NSLMLGLGGA TLGVILSVFV AYTIVKVRTR AAGILESLSF LSFSFPGIVI GMGFMWFFVR
TPLYATIWAL LIGYIATYLP YGIRPLASAF VQVHSHLEES SLVCGASRMT TMRRIIIPLL
VPGMVSGWIL MATMFVRELT LSVVLSRPGT EVLAVQILRF AEDGLWGRLS ALGIMMIFIS
TILVILANLV GARFKPMEGG G
|
|---|
| |