Gene Pecwa_1771 details

Gene Information

• Locus tag: Pecwa_1771
• ID: 8530169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1917469
• End bp: 1919547
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 55%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003259164
• Protein GI: 261821058

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.715719
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACACA CACTAACTCT CTCACCGACA CCTAAACGGG ATCCCGTTTT CCTGTGGCTG 
GCGCTGATTG CTGCGACATT TTTGCTGCTG CCAGCGTGGA GTCTGGATTA TGGCCTGCTC 
GATGCTTCAC GCGATGAACT GCTGACGGCC TACAGTTGGT CGAACCTGAA TATCAGCCTG 
CTTTGGTTTC TGCTCCCGCT AGGATTACTG GCGCGTCCAC TGCATACACC CAGCCGGGGA 
CAGCGTGGTC GCCACCGTTT TGATGCGGCT TATGCATTGT TCTGCATCCT CTTCGTGGTC 
ATCAGTGCAA CCATTGAAGG CCGCGGAATG GGCTATGGCT CCATTGGGCT GTTTGTGGCG 
CTGAGTGCAA TTATTACGCT GGCGCTCTCG CGGCTTGACT GGCTGGGTGG CGATCGCTTC 
GTTATCGGCT CGCTCATCAG CATCATTGCA CTGATTAGCG TCTTTATTCT TTACCCCAGC 
ATCGCCATTT TCATCCCGAT GTTCACCAAT GACAGTGGTG AATTTGCGCC GCTGTCGTTT 
ATGCAGATTC TAAGTCAGGC CCACATTTTA CGAGTGATCT GGAATTCATT CCTGCTATCG 
GTTGCTGTTG GGATCGGCTG TACCTTCTTC GGTATGGTGC TGGCGATTTA TACCTCGCGC 
ATTGCCCGAC GTTCCGCGAT TATCGGCCGC ATTTTCTCCA TTCTGCCTAT CGTAACGCCA 
CCGTTTGTCG TCGGGTTAGG TGTGACACTA ATGATGGGTC GCTCCGGTTA TATCACCGAG 
CTGATGGTGG CCTGGTTTGG CCTGACGAAC ACTAACTGGC TGTACGGATT CACCGGCATC 
TGGCTGGCGC AAGTGCTCGC CTTCACGCCG ATGTCGTTTA TGATTCTCGA AGGCGCGATG 
AAGACGATTC ATCCGTCGCT GGAAGAAGCA TCTTACACGC TGCGTGCTAA CCGCTATCAA 
ACCTTTCAGC GGGTTTTCCT GCCTCTACTG AAACCGGCAC TGGCTAACTC GTTCCTGATC 
GTGATCGTCC AGTCGCTGGC CGATTTCAGT AACCCGCTGG TGTTAGGCGG TAACTTCGAC 
GTACTCGCGA CCCAGATTTA CTTCTACATC ACGGGAGCAC AGTTGGATTA CCAGTCAGCC 
AGTACGCTCG GCGTTGTCCT GCTGCTGTTC TCACTGGCCG TATTCTGCGT GCAATATCTG 
TGGATCGGTA AACGCTCCTA CGTCACGATT TCCGGCAAAT CCTCTCGGGG TGATGTGCAG 
CCGCTGCCCG TCTCGCTGGT ATGGATCGTC AGCATCCTGC TTTATGTCTG GATTGCCTTT 
AACGTCCTGC TGTATGGAAG CATTTTCTAC GGCAGTTTTA CCGTTAACTG GGGCGTGGAT 
TACACCCTGA CGCTGGCAAA CTTCAGCAAG CTGTTCGGGC AAGGCTTTAG CGACGGCGCC 
TGGCCTTCCC TGCTGGATAC ACTGCTGTTC GCGGGCATCG CCGCACCGAT TACAGCACTG 
TTCGGGCTGC TTATCGCCTA CATCGTGGTG CGCCAGCAGT TCTACGGCAA GAAGGCTATC 
GAGTTCACCA CCATGCTGTG CTTTGCCGTG CCAGGCACCG TTGCCGGTGT GTCTTACATT 
CTGGCCTTTA ACAGCGCGCC GGTTTACTTA ACGGGAACGG CGGTGATCGT CATCATGTCG 
ATGGTCATGC GTAACGTACC GGTCGGTATT CGCGCCGGTA TCGCCGGGCT GGGGCAGTTG 
GATAAATCAC TGGACGAGGC ATCGCTCAGC CTGAGAGCGG GTTCGATGCG CACGGTGTTT 
TATATTCTGC TCCCGCTGCT GCGCCCGGCC ATTCTGTCCG CACTGATTTA CAGCTTCGTG 
CGTGCCATTA CTACCGTCAG CGCCATTATC TTCCTGGTTA CGCCAGACAC CCGTGTCGCT 
ACGTCTTACA TTCTTAACCG CGTGGAAGAC GGCGAATACG GCATGGCAAT TGCCTACGGT 
TCCATCCTGA TTGTGGTCAT GCTGGCCATT ATTTTCCTGT TCGATTATCT GGTCGGTGAA 
GCGCGGGTTT CCCGCACGAA AGCCAAGAAT AGTGACTAA 

 

Protein sequence

MSHTLTLSPT PKRDPVFLWL ALIAATFLLL PAWSLDYGLL DASRDELLTA YSWSNLNISL 
LWFLLPLGLL ARPLHTPSRG QRGRHRFDAA YALFCILFVV ISATIEGRGM GYGSIGLFVA 
LSAIITLALS RLDWLGGDRF VIGSLISIIA LISVFILYPS IAIFIPMFTN DSGEFAPLSF 
MQILSQAHIL RVIWNSFLLS VAVGIGCTFF GMVLAIYTSR IARRSAIIGR IFSILPIVTP 
PFVVGLGVTL MMGRSGYITE LMVAWFGLTN TNWLYGFTGI WLAQVLAFTP MSFMILEGAM 
KTIHPSLEEA SYTLRANRYQ TFQRVFLPLL KPALANSFLI VIVQSLADFS NPLVLGGNFD 
VLATQIYFYI TGAQLDYQSA STLGVVLLLF SLAVFCVQYL WIGKRSYVTI SGKSSRGDVQ 
PLPVSLVWIV SILLYVWIAF NVLLYGSIFY GSFTVNWGVD YTLTLANFSK LFGQGFSDGA 
WPSLLDTLLF AGIAAPITAL FGLLIAYIVV RQQFYGKKAI EFTTMLCFAV PGTVAGVSYI 
LAFNSAPVYL TGTAVIVIMS MVMRNVPVGI RAGIAGLGQL DKSLDEASLS LRAGSMRTVF 
YILLPLLRPA ILSALIYSFV RAITTVSAII FLVTPDTRVA TSYILNRVED GEYGMAIAYG 
SILIVVMLAI IFLFDYLVGE ARVSRTKAKN SD