| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1098 |
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| Symbol | |
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| ID | 7969620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1203548 |
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| End bp | 1205824 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791694 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943015 |
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| Protein GI | 239814105 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.276526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGCCC CTTCCATCGG CGGCGCGCCG GCCAATCCGG CGTCGGTGGC CGCCGCCCGG
CGGGCGCAGC GCTGGATCCG GGCGTGGGTG GCGCTGGGTT TTGCGGCCTA CCTGCTGCTG
CCCTGGTATG CGATCCAGGA CGCCACCTGG TACGAAGCCG TTCCGCAGGT CTTCGGCCGG
GCCGAGGGTG CCAACGGCCT GATGCAGGCA CTCACGCAGG GACGCGGCTG GCTCTTCATC
GGGCTTGCAG GCCTGGCGAT GTGCGCCATC GGCGCCTGGC GGCCGGCCGG CCGCGCGCAG
GGGCGCTGCC TGCTGGCGGG CGGCGCCATC GGTGCCTTGG GCCTGGCGAT CACCGGCTTC
GCCATCGGCG CGCGCGGCTG GAGCTTCGAA GCGCTCAACA CGCAGTTCGG CGAACTTGCG
ATCAACCAGT TCGGCATCGG CGCGGGCGGC GCCGTGGCGC TCGCGGCGCT CGCGATGCTG
GCGGCCTTCG GCATTGCGCG GCTCGGGCTC TTCAAGGGCG ACCTGTTCGT GGCGGCCGCG
GTCATCGGCT GCGGGGTGCT GATGGCGCTG TTCATCGCCT ATCCGGTGAG CAAGGCGCTC
GCGGGTGCCT TCCTCGACGA AGACGGCCGC TGGTCGATCA CGGCCTTTGC CGCGCGCGTG
TTCGCCGAAC GCATCTGGGG CGTGGGCTGC CTGGCGGGCG GCGTGCGCTG CGGCGTGGCC
TGGAACACGC TCGTGCTGGC GCTGCTGACG GCCGCCGGCA CCACCTTCCT CGGCACCCTG
ATGGCCTTGA TGGCCGAGCG CGGCAGCAAG CGCGGCCAGG GCGCGCTGCG GGTGCTCGCG
CTGCTGCCGA TCATCACGCC GCCCTTCGTG GTGGGGCTCG GGCTCATTCT GCTGTTCGGC
CGCGCGGGCA TCGTCAACCA GCTGCTCGAG AGCGCGTTCG GCATCGAGCC GACACGCTGG
TTCTACGGCA TGCCGGGCGT GCTGGTGGCG CAGCTCTTCG CCTTCACGCC CATCGCCTTC
ATGATCATGC GCGGGGTGGT GCAGGGCATT GCGCCCAGCC TGGAAGAGGC GGCGCAGATG
CTGCGCGCCG ACCGCCGCCG CACCTTCTTC ACCATCACGC TGCCGCTTTT GAAGCCCGGG
CTGGCCAATG CCTTCCTGGT CGGCTTCATC GAGAGCATTG CGGACTTCGG CAACCCGGTG
GTGGTGGGCG GGCAGTTCTC GGTGCTGTCG ACCGACATCT TCTTTGCCAT CGTCGGTGCG
CAGTACGACC AGGGACGCGC GGCCTCACTG GCGTGGGTGC TCACGGTCTT TGCGCTCGGC
GTGTTCGCGC TGCAGCGCGG CGTGCTCGGC CGGCAGAACT ACACCACCGT GAGCGGCAAG
GGCGACGCGG GCATTGCGAT GGCGCTGCCG GACGGCGTGC GGCGCACCAT CCAGTGCATC
GCGCTGCCGT GGATCGCGTT CACCGCGGTG GTCTACCTGT TCGCCTTTGC GGGCGGCTTC
GTGCAGACCT GGGGGCGTGA CTACAGCTTC ACGCTCGATC ATTTCAAGAA TGCGTTCGCG
CTCGAATGGG GCCAGTTCGG CCTGGTGTGG GCCGGCACCG CGTGGAATTC GCTGCTCACC
ACGCTCAAGC TCGCGGGCAT CTCCGCGCCC ATCACGGCCG CGCTGGGCCT GCTGATTGCC
TGGCTGCTCG CGCGCAACGA GTTCAAGGGG CAGGGCGTCT TCGAGTTTGG CGCGCTGCTG
GCCTTTGCCA TTCCGGGCAC GGTGCTCGGC GTGAGCTACA TCCTGGCCTT CAACGTGCCG
CCGTTCGAGC TCACGGGCAC CGGGCTCATC ATCGTGCTGT GCTTCATGTT CCGGAACCTG
CCGGTGGGCG TGCGGGCCGG CACGGCGGCC TTCAAGCAGC TGGACCGCTC GCTCGACGAA
GCCTCCCTGA TGCTGCGCGC CTCTACGGCC CAGACGCTCT TCAAGGTGGT GCTGCCGCTG
CTGAAACCCG CGCTGGTGGC TGCGCTGGTC TACAGCTTCG TGCGCGCCAT GACGACGGTG
AGCGCGGTGA TCTTCCTGGT CACGGCCGAG AACGAACTGG CCACCACCTA CATCATCGGC
CGCGTGGGCA ACGGCGACTA CGGCATTGCG CTGGCCTACT GCACGGTGCT GATGGTGCTG
ATGTCGCTGG CGATTGCGCT GGTGCAGTTC GTGGTGGGCG AGCGCAGGCT GGGGCGGCGC
GGCACTGCGC CTCCGCAACA AGGACATCAC AAAATGGAAA GCCTGGCGAC ACCATGA
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| Protein sequence | MQAPSIGGAP ANPASVAAAR RAQRWIRAWV ALGFAAYLLL PWYAIQDATW YEAVPQVFGR
AEGANGLMQA LTQGRGWLFI GLAGLAMCAI GAWRPAGRAQ GRCLLAGGAI GALGLAITGF
AIGARGWSFE ALNTQFGELA INQFGIGAGG AVALAALAML AAFGIARLGL FKGDLFVAAA
VIGCGVLMAL FIAYPVSKAL AGAFLDEDGR WSITAFAARV FAERIWGVGC LAGGVRCGVA
WNTLVLALLT AAGTTFLGTL MALMAERGSK RGQGALRVLA LLPIITPPFV VGLGLILLFG
RAGIVNQLLE SAFGIEPTRW FYGMPGVLVA QLFAFTPIAF MIMRGVVQGI APSLEEAAQM
LRADRRRTFF TITLPLLKPG LANAFLVGFI ESIADFGNPV VVGGQFSVLS TDIFFAIVGA
QYDQGRAASL AWVLTVFALG VFALQRGVLG RQNYTTVSGK GDAGIAMALP DGVRRTIQCI
ALPWIAFTAV VYLFAFAGGF VQTWGRDYSF TLDHFKNAFA LEWGQFGLVW AGTAWNSLLT
TLKLAGISAP ITAALGLLIA WLLARNEFKG QGVFEFGALL AFAIPGTVLG VSYILAFNVP
PFELTGTGLI IVLCFMFRNL PVGVRAGTAA FKQLDRSLDE ASLMLRASTA QTLFKVVLPL
LKPALVAALV YSFVRAMTTV SAVIFLVTAE NELATTYIIG RVGNGDYGIA LAYCTVLMVL
MSLAIALVQF VVGERRLGRR GTAPPQQGHH KMESLATP
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