| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1555 |
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| Symbol | |
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| ID | 4600904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1505507 |
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| End bp | 1507192 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639774329 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920954 |
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| Protein GI | 119720459 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.488219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGCAG ATATTCGGTG GATAAAAAAT CTTTATTTTT TTGGGCGTTG CGCTATGGTG
CCTAAGTGGC TGACCGTCGC TCTTCTAGTA GCGGCCGTAG CCCTGGTTCT GCCCCCCATA
CTGCTCATTT TCTCAGATGT GGCAACGCTG GCCGTCGAGG ACCCGCAGAG ACTGAACTCT
CTGCTCTCCA AGCCCTACTA CCTGTATAGG CCGCTAGTAA ACTCGGTGTT CGTGTGTAGC
CTTACGGCTC TCCTGGCCAC GCTTGTAGGG CTGATGTTCG CGTGGCTCCT GGCGCGCTAC
AACATCCCGA GAAGAGAGCT CCTACTCTCC CTGCTCACGG GACCCTACGT GATACCCTCG
TTCCTGATAG CAACAGGGTG GATTATGCTC TGGACAAACC GCGGTCTCTA CGAGCAGTTC
ACGGGGATGC GGAGCCCGCT AAACCCCTAC GGACCCTTAA ACCTCGTTTT CGTGCTCGCT
TTGCACAACT ACCCGCTCGC CATGCTCTCG ATCTACCCCG CGCTACTCAA CCTGGACGCA
AGCCTGGAGG AAGCCGCTAG GATCCACGGT GTGTCTCCGC GGAGGATAGC CACGGGTATA
GTGCTACCCC TCGTGCTACC GAGCGTGCTC TCCGGCTTTA TACTGACGTT CGCCTACTCG
ATCTCGGAGT TTGGTGCCCC GGCGGTGCTA GGCCTCCCCG TGGGGTACAC AACGCTTGTA
ACGCAGATAT ACTCCCTGAT GACCGTGTCC CCCGTGGACT ACGCGGCCGC GGAGGTACTC
TCGGTTGTGC TCTCCGCTAT AAGCCTGCTC GCGCTCTACC TGAACTTCTT CGTGCTTTCG
AGAAAGAGGT ACGCGGTCGT GACGGGGAAA GCGGCCAGAG TCGAGGAAAG GAAGCCTAGC
TACAAGGCTT TCGCGGCGAT TGCAACCTCC TTGGTGCTCG TCTACATGCC AATACTGGCC
GTAATCGTGG GTTCCCTTGT GAGAACGTGG GGCGAGCCGA TAACGCTCTC CAATCTGGGG
GTTGACCACT ACCTGAAGAT ACTCGCTATG GAGCGTAGCA GGAGGGCACT CGTAGCTACC
CTCCTCCTAA GCCTGGGGGC AGCCAGCATA GCGAGCATCG TAGGGCTACT CGTCGCATAT
GTTGCCGTCC GCTCCCCCTC GCTACTCTCC AGGATCATAG ACTACATAGT CTTCCTCCCG
TTCAGCATAC CGGGGCTCGT TATAGGCGTG GGGCTCCTGG TAGCGGCTGG TAAGCTTTAC
GGACCACTCT ACGGGACAGT GGGAATCCTG CTCGTAGCTT TCGTGATAAG GTTCCTGCCC
TACGCTACTA GGACGCTAGC CCCCGCACTC CTCCAAATAG ACGAGAGCCT CGAGGAGGCC
TCCAGGATTC ACGGAGTAAG CTTCGGCAAA ACCCTAGCAA GGGTCGTGCT CCCGCTTTCA
GCAGGCGCGC TACTCAGTAG CTGGATCTTC GTCTTCAACA GCTCGATGAA GGAGTTAAGC
GCTAGCGCTA TACTCTCAAC GCAGGTTGAG ACCGCGATTG TCGTGGCTTT CCTCCTATTC
ACGGACGGGT ACTTCAGCGA CGGGGCAGCG CTCTCAATAA TAATCGTCCT GGTAACTCTT
CTCCTGACGG CGGTAGCCTC CAAGCTCGCG AAGGGAGGAG CCCTAGCGAG ACGGCAAGGC
GCGTAG
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| Protein sequence | MDADIRWIKN LYFFGRCAMV PKWLTVALLV AAVALVLPPI LLIFSDVATL AVEDPQRLNS
LLSKPYYLYR PLVNSVFVCS LTALLATLVG LMFAWLLARY NIPRRELLLS LLTGPYVIPS
FLIATGWIML WTNRGLYEQF TGMRSPLNPY GPLNLVFVLA LHNYPLAMLS IYPALLNLDA
SLEEAARIHG VSPRRIATGI VLPLVLPSVL SGFILTFAYS ISEFGAPAVL GLPVGYTTLV
TQIYSLMTVS PVDYAAAEVL SVVLSAISLL ALYLNFFVLS RKRYAVVTGK AARVEERKPS
YKAFAAIATS LVLVYMPILA VIVGSLVRTW GEPITLSNLG VDHYLKILAM ERSRRALVAT
LLLSLGAASI ASIVGLLVAY VAVRSPSLLS RIIDYIVFLP FSIPGLVIGV GLLVAAGKLY
GPLYGTVGIL LVAFVIRFLP YATRTLAPAL LQIDESLEEA SRIHGVSFGK TLARVVLPLS
AGALLSSWIF VFNSSMKELS ASAILSTQVE TAIVVAFLLF TDGYFSDGAA LSIIIVLVTL
LLTAVASKLA KGGALARRQG A
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