| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0626 |
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| Symbol | |
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| ID | 5134558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 683147 |
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| End bp | 685249 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530948 |
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| Product | iron(III) ABC transporter, permease protein |
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| Protein accession | YP_001215465 |
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| Protein GI | 147672185 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCATGC ATGAGCCTTC TCAAGCGCTG AAATTGACAC TCCACCAGCC AGTCAAAACC
GATCCGGTTT TTTACTGGCT GGCTGCGGTG CTGTTTAGCT TTATTCTTCT GCCATCCTTT
GCTCTGGATT ATGGGCTATT TGAATCCACT CCAGATGAAT TTTATGCCGC CATGGGTTGG
AGTGAACCAA ACATTTCCTG GTTCTGGTTT AGTTTGCCTT TATTGCTGGC TTTTCGGCCT
CGGCAAGCTC AGGGACGTCA GTCCACAAAC CGCCACTATC TCGACATTGC GTATTCTGGC
TTCTGTATGC TGGCTATTTT GCTCAGCGCA TGGCTAAGCG GCAAAGGATT GGGTTATTCC
AGCATCATTC TGTTCACTGC CCTTGGTGCT ATTATGACGC TGGCCTTCGC CCGCTTGGAA
TACCTCGGTG GCGACCATTT TGTCATTGGC TCGCTGATCA GCATCATTCT GCTGATTGTG
ATTTTTATTG TTTATCCGAG CATCGCCATT TTCCTGCCGA TGTTTAAAGA TGACGTGGGC
AACTGGACGG CATGGCAGTT CATGACGATC CTTTCTCAAT CTCATACCCT CACCGTCATT
TACAACTCGA TTGCACTCGG CATTGCGGTA GGTGTTGGTG CAACCTTCTT CGGACTGATT
TTTGCCATTT ACACCACACG TATTGCTAAA CGCTCCGCCT TTATCGCGCG CGTGTTTTCC
ATTTTACCGA TCGTGACACC GCCCTTTATT GTCGGGTTGG GCGTGACTTT AATGCTGGGG
CGTTCAGGTT ATATCACTGA GTTGATGGTC GATGGGTTTG GTTTACAGAA AACCAACTGG
TTGTACGGCT TCACGGGCAT TTGGCTCGCG CAAGTGCTGG CGTTTGCGCC TATGTCCTTC
ATGATTTTGG ATGGCGCACT TAAATCACTG CATCCTTCAT TGGAAGAGGC TTCCTATACG
CTTAAAGCCA ACCGCTATCA AACCTTCTTC GGCATTATCA TGCCGCTGCT TAAGCCCGCG
TTAGCCAACT CATTTTTGAT CATATTCGTG CAATCATTGG CAGATTTCAG TAACCCCTTG
GTACTGGGCG GCAGCTTTGA TGTGCTCGCA ACACAAATCT ATTTCTATAT TGCAGGGGCG
CAACTGGATT ACGCTTCAGC CAGTACACTC GGCTCGGTTC TGCTGCTGTT CTCACTCGCG
ATTTTTGTGG TGCAGTATCT GTGGATCGGC CAGCGTTCCT ACGTCACCAT TTCTGGTAAA
GCCTACCGCG GCGATGTGCA AGAGATGCCA GCCTCACTGA AATTGGGCGT CACTGTAACT
TTATATGCGT GGATGATCTT TAACGTTCTG CTCTACGGCA GCATCTTCTT CGGCAGCTTT
ACGGTTAACT GGGGCGTCGA TTACACCCTG ACCTTCAAAA ACTACCTCAA TCTGTTTGGG
AATGGCATGT CTGATGGTGC TTGGCCTTCA CTCATCACTA CCATGATTTA TGCGGGTGTG
GCGGCTCCGA TTACTGCCCT GTTCGGCTTA TTGATTGCTT ATGTGGTGGT GAGACAACAG
TTCTACGGCA AAAAAGTGAT CGAGTTTTCC ACCATGCTCT GCTTTGCCGT ACCCGGTACA
GTGGCAGGGG TTTCCTACAT CTTGGCGTTT AACGATGCGC CGATTTATTT AACTGGCACC
GCCGCAATTG TGGTGATCTC AATGGTGATG CGTAACGTGC CTGTGGGGAT CCGCTCTGGT
ATTGCAGGAC TCGGGCAGCT CGATAAATCA TTGGATGAAG CTTCACTGAG CTTACGTGCC
AGCTCATTAC AAACCATTCG CTACATTATT TTGCCACTGC TGCGCCCCGC GATTCTTTCC
ACGCTGGTGT ACAGCTTTGT GCGGGCGATG ACCACGGTCA GTGCGATCAT CTTTCTGGTT
ACACCGGAAA CCCGCGTTGC AACGTCCTAC ATTCTGAACC GAGTCGAAGA TGGTGAGTAC
GGCATCGCTA TCGCCTACGG CTCCGTGCTG ATTGTCGTGA TGTTAGCCAT CATTTTGTTG
TTTGATTTAC TGGTCGGTGA AGCTCGTGTT TCTCGTTCCA AAGCCACCAA TCAAGATTCT
TAG
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| Protein sequence | MTMHEPSQAL KLTLHQPVKT DPVFYWLAAV LFSFILLPSF ALDYGLFEST PDEFYAAMGW
SEPNISWFWF SLPLLLAFRP RQAQGRQSTN RHYLDIAYSG FCMLAILLSA WLSGKGLGYS
SIILFTALGA IMTLAFARLE YLGGDHFVIG SLISIILLIV IFIVYPSIAI FLPMFKDDVG
NWTAWQFMTI LSQSHTLTVI YNSIALGIAV GVGATFFGLI FAIYTTRIAK RSAFIARVFS
ILPIVTPPFI VGLGVTLMLG RSGYITELMV DGFGLQKTNW LYGFTGIWLA QVLAFAPMSF
MILDGALKSL HPSLEEASYT LKANRYQTFF GIIMPLLKPA LANSFLIIFV QSLADFSNPL
VLGGSFDVLA TQIYFYIAGA QLDYASASTL GSVLLLFSLA IFVVQYLWIG QRSYVTISGK
AYRGDVQEMP ASLKLGVTVT LYAWMIFNVL LYGSIFFGSF TVNWGVDYTL TFKNYLNLFG
NGMSDGAWPS LITTMIYAGV AAPITALFGL LIAYVVVRQQ FYGKKVIEFS TMLCFAVPGT
VAGVSYILAF NDAPIYLTGT AAIVVISMVM RNVPVGIRSG IAGLGQLDKS LDEASLSLRA
SSLQTIRYII LPLLRPAILS TLVYSFVRAM TTVSAIIFLV TPETRVATSY ILNRVEDGEY
GIAIAYGSVL IVVMLAIILL FDLLVGEARV SRSKATNQDS
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