| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3889 |
|---|
| Symbol | |
|---|
| ID | 4665651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4312950 |
|---|
| End bp | 4314605 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639825078 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_972207 |
|---|
| Protein GI | 120612529 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGCA CGCTGCGTCG CGATCCCGCA TGGCTGGCGC TCGGCATCGG CGCCATCGCG
CTGCTGCTGG TGTTTCTCGG CTGGCCGCTG GTCGGCATGC TGGCCAAGTC GTTCATCGGT
GCGGACGGCC GGGTAGGCCT GGGCGGCTAC GTGCGGTTCT TCGCGGACCG CACCTACCGC
GAGGTCTTCG TCAACACGTT GATCCTCGGC GTTGCGGTCA CCGCGACCTC CATGCTCGTG
GGGGGATGCC TCGCCCTGGT CGTGGCCCGC TGCAGGTTCC CGCTGGCCGG CCTGGTCACG
GCGCTACCGC TCATCACCCT CGTCATTCCC GACGTGGTGG TGGCGACTGC CTGGCTGCTG
ATCCTGGGAA AGCAGGGCCT GGTCAATGCG CTGCTGGCCC CGCTCGGCAT CGAACTGCCG
ATGCTGTACT CCTGGTGGGG CATGGTCTTC GTGATGACGC TGAACAACTA CGTGTACGCC
TTCGTCGCGG TGCTCGTGGG TTTGAAGTCG ATGGACCGCA ACTTGGAGGA GGCGGCCCTG
AGCCTCGGCC GGCCGCTCCC GCACGTGCTG GGCGGCGTGA CGCTGCCGCT GCTGCTGCCC
TCGGTGTTCG CCGGCGCGCT GATTGTCTTC ACCCATGTGA TCGGCAGCTT CGGCGTGCCC
GCCATCCTGG GCGCCCGCAC GCCGGTGCTG GCCGTGAAGG CCTACAACGA GTTCGTGAGC
GAGATGGGCG GCAATCCCCA GATGCAGACC ACCATGGCGT CGCTGCTGGT GTGCCTGGGC
GCGGGGTTGC TGCTGGTGCA GAAGTTCATC GTCGAGCGGC GGCAGTTCCA GATGGAGGCC
GGCCGTACGC CCCCTGCGCT CACCATCCGG GGCGTGCCGG CGGTGCTGGC CAGCGGCGGC
GTGCTGTTCG TGGTGGCGCT CTCGCTGCTG CCGGCGCTGG TGGTGGTGGT CACGGCCTTC
ACGCCCTCCG TGGGGCCGGT GCTGCGCTAT GGCGGCTTCA CGCTGGCGCA TCTGCAGTAC
GCCCTGGTGC GCGCACCGGA GCCGCTCTAC AACTCGCTGT TCCTGGCATC GGTGGCGACG
GCGGCGGGCG TGCTGTTCTC GGTGGTCTCG GCCTACCTCA TCGTCAAGCG CCGGTCGCCG
CTCACGCATG CGCTGGACGT GCTGGTGATG CTGCCGCTGA CGATCGCGGG CACGGTGCTG
GGCATCGCCC TCATCAACGC CTTCAACACG GGATGGCTGG TGCTGACGGG CAGCTGGGTG
GTCATGGCGC TGGCGTACTT CCTGCGCCGC GTGCCCACCA GCGTGCGCGC CGCGGTCGGG
CCGCTGCACA ACCTCAAGGA CTCCATCGAG GAGGCTTCCA TGAGCCTGGG CGTCAGCGCG
CTCAAGAGCT TCTTCCGCGT GGTGCTGCCC GTCATCGGCC CGTCCGTGGT CGCCGCGGCC
GTGCTGATGT GGGTGACCAC GCTGTCGGAA CTCTCGGCCA CCGTGGTGCT GTATTTCGGT
GGCATGAACA CCATGCCCAT CGAAATCTTC CAGCAGATCG ACAGCGGGCG CATGGCCCTG
GCATGCGCGT ACAGCCTCGT GCTGCTGCTG ACGATCTTCG TGCCGCTCGG GCTGGCGCGC
TGGCTCTTCC GGCTCAAGGT CGGAACTCTT GATTGA
|
|---|
| Protein sequence | MLGTLRRDPA WLALGIGAIA LLLVFLGWPL VGMLAKSFIG ADGRVGLGGY VRFFADRTYR
EVFVNTLILG VAVTATSMLV GGCLALVVAR CRFPLAGLVT ALPLITLVIP DVVVATAWLL
ILGKQGLVNA LLAPLGIELP MLYSWWGMVF VMTLNNYVYA FVAVLVGLKS MDRNLEEAAL
SLGRPLPHVL GGVTLPLLLP SVFAGALIVF THVIGSFGVP AILGARTPVL AVKAYNEFVS
EMGGNPQMQT TMASLLVCLG AGLLLVQKFI VERRQFQMEA GRTPPALTIR GVPAVLASGG
VLFVVALSLL PALVVVVTAF TPSVGPVLRY GGFTLAHLQY ALVRAPEPLY NSLFLASVAT
AAGVLFSVVS AYLIVKRRSP LTHALDVLVM LPLTIAGTVL GIALINAFNT GWLVLTGSWV
VMALAYFLRR VPTSVRAAVG PLHNLKDSIE EASMSLGVSA LKSFFRVVLP VIGPSVVAAA
VLMWVTTLSE LSATVVLYFG GMNTMPIEIF QQIDSGRMAL ACAYSLVLLL TIFVPLGLAR
WLFRLKVGTL D
|
|---|
| |