Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3665 |
Symbol | |
ID | 4312561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 510879 |
End bp | 512651 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151507 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_775553 |
Protein GI | 115358415 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.447627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.577974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCAA CCAGCACACG CGGACCGGCG CCGGCCGTTC CGCCCTCCAC CGGCCAGGAC GATGCGATTC CCGCGCTGCG GGCCAGCGGC CTGCAGCCGC TCGCCGGCAT GCTGCGCTGG ATCGTCGTCG CGGTGCTGAC CGTCGCGGTC GCGCTGCCGC TCGGCTTCAT CCTGTTCCAG AGCCTGCTGT CCGCGCCGTT CTTCGACGCG AACAAGACGC TCGGCGTCGA AGGCTTCCGC TTCATCTTCA CCGACCCGGA CTTCTGGTTG GCCGTGAAGA ACTCGTTCAT CATCGCCGGC GGCATGCTGT TCATCTCGAT CCCGCTCGGC GGCATCCTCG CGTTCCTGAT GGTCCGCACC GACCTGCCCG GCCGCCGCTG GCTCGAACCG CTGCTGCTCA CGCCGGTGTT CGTGTCGCCG ATGGTGCTCG CGTTCGGCTA CGTGGTCGCC GCCGGCCCGG TCGGTTTCTA CTCGGTGTGG TTCAAGGAAT TGTTCGGGGT GCATAACGTG CCCTGGAACA TCTATTCGAT CTTCGCGATC ACGGTGATCG TCGGCCTCAC GCACGTGCCG CACGTGTACC TGTACTCGTC GGCCGCGCTG CGCAACCTCG GCTCGGACGT CGAGGAAGCG GCGCGCGTGT CGGGTGCCCG CCCGTTCCGC GTCGCGCTCG ACGTGAGCCT GCCGATGACG ATGCCCGCGC TGCTGTTCGC CGGCGTGCTC GTGTTCTTCC TCGGCTTCGA GGTGTTCGGG CTGCCGCTGG TGCTCGGCGA TCCGGAAGGC CACCTCGTGC TCGCGACCTA CCTGTACAAG CTGACCAACA AGCTCGGCGT GCCGTCGTAT CACCTGATGG CCGCGGTCGC GGTGTGCATC GTCGCGATCA CGTTCCCGCT CGTGCTGCTG CAGCGCCGCC TGCTGAAGAC GGCGAACCGC TTCGTCACCG TGAAGGGCAA GGCCGGCCGC TCGACGGTGC TGCCGCTCGG CGTGTGGCGC TGGGTCGCGC TCGCGATCGT CGCGCTGTGG CTGATGCTGA CCGTGATCGT GCCGATCTCG GGCATCGTGC TGCGCGCGTT CGTGACCAAC TGGGGCGAAG GCGTCGCGCT CGCCGAAGTG CTGACGCTGG CGAACTTCAT CGAGCTGTTC GAACAGGACA ATCTCGTGCG CGCCATGCTC AACACGCTCG GCATCGGCGT GATCGGCGGC GCGCTCGCGA TCGGCTTCTA CTCGCTCGTC GCGTTCGCCG GCCATCGCCG CAACGACTGG GCGACGAAAC TGCTCGACTA CCTCGTGCTG CTGCCGCGCG CGGTGCCGGG CCTGCTCGCC GGTCTCGCGT TCCTGTGGAT CTTCCTGTTC GTCCCGGGCC TGCGCGAGCT GAAGAACTCG ATGTGGAGCA TCTGGATCGC GTACACGGTC GTGTGGCTCG CATACGGGAT GCGCCTGATC CAGAGCGCAC TGCTGCAGGT CGGCCCGGAG CTCGAGGAAG CCGGCCGCAG CGTCGGCGCG ACGCGCAGCC GCGTATCGCT CGACGTGACG CTGCCGCTCG TGCGCTTCGG CCTGCTCGCC GCGTGGCTCC TGATCTTCAT GATCTTCGAG CGCGAATACT CGACCGCCGT CTATCTGCTG TCGCCCGGCA CCGAAGTGAT CGGCGCGCTG CTCGTGTCGC TGTGGGCGAC CGGCGCCGTC GACCAGGTCG CCGCGCTCTC TGTCATCAAC ATCGCGATGG TCGGCGCCGG TCTCGGCGTG GCCCTGCGCT TCGGAGTGAA ACTTCATGGA TAA
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Protein sequence | MLSTSTRGPA PAVPPSTGQD DAIPALRASG LQPLAGMLRW IVVAVLTVAV ALPLGFILFQ SLLSAPFFDA NKTLGVEGFR FIFTDPDFWL AVKNSFIIAG GMLFISIPLG GILAFLMVRT DLPGRRWLEP LLLTPVFVSP MVLAFGYVVA AGPVGFYSVW FKELFGVHNV PWNIYSIFAI TVIVGLTHVP HVYLYSSAAL RNLGSDVEEA ARVSGARPFR VALDVSLPMT MPALLFAGVL VFFLGFEVFG LPLVLGDPEG HLVLATYLYK LTNKLGVPSY HLMAAVAVCI VAITFPLVLL QRRLLKTANR FVTVKGKAGR STVLPLGVWR WVALAIVALW LMLTVIVPIS GIVLRAFVTN WGEGVALAEV LTLANFIELF EQDNLVRAML NTLGIGVIGG ALAIGFYSLV AFAGHRRNDW ATKLLDYLVL LPRAVPGLLA GLAFLWIFLF VPGLRELKNS MWSIWIAYTV VWLAYGMRLI QSALLQVGPE LEEAGRSVGA TRSRVSLDVT LPLVRFGLLA AWLLIFMIFE REYSTAVYLL SPGTEVIGAL LVSLWATGAV DQVAALSVIN IAMVGAGLGV ALRFGVKLHG
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