Gene Bamb_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3665 
Symbol 
ID4312561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp510879 
End bp512651 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content67% 
IMG OID638151507 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_775553 
Protein GI115358415 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.447627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.577974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCAA CCAGCACACG CGGACCGGCG CCGGCCGTTC CGCCCTCCAC CGGCCAGGAC 
GATGCGATTC CCGCGCTGCG GGCCAGCGGC CTGCAGCCGC TCGCCGGCAT GCTGCGCTGG
ATCGTCGTCG CGGTGCTGAC CGTCGCGGTC GCGCTGCCGC TCGGCTTCAT CCTGTTCCAG
AGCCTGCTGT CCGCGCCGTT CTTCGACGCG AACAAGACGC TCGGCGTCGA AGGCTTCCGC
TTCATCTTCA CCGACCCGGA CTTCTGGTTG GCCGTGAAGA ACTCGTTCAT CATCGCCGGC
GGCATGCTGT TCATCTCGAT CCCGCTCGGC GGCATCCTCG CGTTCCTGAT GGTCCGCACC
GACCTGCCCG GCCGCCGCTG GCTCGAACCG CTGCTGCTCA CGCCGGTGTT CGTGTCGCCG
ATGGTGCTCG CGTTCGGCTA CGTGGTCGCC GCCGGCCCGG TCGGTTTCTA CTCGGTGTGG
TTCAAGGAAT TGTTCGGGGT GCATAACGTG CCCTGGAACA TCTATTCGAT CTTCGCGATC
ACGGTGATCG TCGGCCTCAC GCACGTGCCG CACGTGTACC TGTACTCGTC GGCCGCGCTG
CGCAACCTCG GCTCGGACGT CGAGGAAGCG GCGCGCGTGT CGGGTGCCCG CCCGTTCCGC
GTCGCGCTCG ACGTGAGCCT GCCGATGACG ATGCCCGCGC TGCTGTTCGC CGGCGTGCTC
GTGTTCTTCC TCGGCTTCGA GGTGTTCGGG CTGCCGCTGG TGCTCGGCGA TCCGGAAGGC
CACCTCGTGC TCGCGACCTA CCTGTACAAG CTGACCAACA AGCTCGGCGT GCCGTCGTAT
CACCTGATGG CCGCGGTCGC GGTGTGCATC GTCGCGATCA CGTTCCCGCT CGTGCTGCTG
CAGCGCCGCC TGCTGAAGAC GGCGAACCGC TTCGTCACCG TGAAGGGCAA GGCCGGCCGC
TCGACGGTGC TGCCGCTCGG CGTGTGGCGC TGGGTCGCGC TCGCGATCGT CGCGCTGTGG
CTGATGCTGA CCGTGATCGT GCCGATCTCG GGCATCGTGC TGCGCGCGTT CGTGACCAAC
TGGGGCGAAG GCGTCGCGCT CGCCGAAGTG CTGACGCTGG CGAACTTCAT CGAGCTGTTC
GAACAGGACA ATCTCGTGCG CGCCATGCTC AACACGCTCG GCATCGGCGT GATCGGCGGC
GCGCTCGCGA TCGGCTTCTA CTCGCTCGTC GCGTTCGCCG GCCATCGCCG CAACGACTGG
GCGACGAAAC TGCTCGACTA CCTCGTGCTG CTGCCGCGCG CGGTGCCGGG CCTGCTCGCC
GGTCTCGCGT TCCTGTGGAT CTTCCTGTTC GTCCCGGGCC TGCGCGAGCT GAAGAACTCG
ATGTGGAGCA TCTGGATCGC GTACACGGTC GTGTGGCTCG CATACGGGAT GCGCCTGATC
CAGAGCGCAC TGCTGCAGGT CGGCCCGGAG CTCGAGGAAG CCGGCCGCAG CGTCGGCGCG
ACGCGCAGCC GCGTATCGCT CGACGTGACG CTGCCGCTCG TGCGCTTCGG CCTGCTCGCC
GCGTGGCTCC TGATCTTCAT GATCTTCGAG CGCGAATACT CGACCGCCGT CTATCTGCTG
TCGCCCGGCA CCGAAGTGAT CGGCGCGCTG CTCGTGTCGC TGTGGGCGAC CGGCGCCGTC
GACCAGGTCG CCGCGCTCTC TGTCATCAAC ATCGCGATGG TCGGCGCCGG TCTCGGCGTG
GCCCTGCGCT TCGGAGTGAA ACTTCATGGA TAA
 
Protein sequence
MLSTSTRGPA PAVPPSTGQD DAIPALRASG LQPLAGMLRW IVVAVLTVAV ALPLGFILFQ 
SLLSAPFFDA NKTLGVEGFR FIFTDPDFWL AVKNSFIIAG GMLFISIPLG GILAFLMVRT
DLPGRRWLEP LLLTPVFVSP MVLAFGYVVA AGPVGFYSVW FKELFGVHNV PWNIYSIFAI
TVIVGLTHVP HVYLYSSAAL RNLGSDVEEA ARVSGARPFR VALDVSLPMT MPALLFAGVL
VFFLGFEVFG LPLVLGDPEG HLVLATYLYK LTNKLGVPSY HLMAAVAVCI VAITFPLVLL
QRRLLKTANR FVTVKGKAGR STVLPLGVWR WVALAIVALW LMLTVIVPIS GIVLRAFVTN
WGEGVALAEV LTLANFIELF EQDNLVRAML NTLGIGVIGG ALAIGFYSLV AFAGHRRNDW
ATKLLDYLVL LPRAVPGLLA GLAFLWIFLF VPGLRELKNS MWSIWIAYTV VWLAYGMRLI
QSALLQVGPE LEEAGRSVGA TRSRVSLDVT LPLVRFGLLA AWLLIFMIFE REYSTAVYLL
SPGTEVIGAL LVSLWATGAV DQVAALSVIN IAMVGAGLGV ALRFGVKLHG