| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0244 |
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| Symbol | |
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| ID | 4908731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 242185 |
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| End bp | 243987 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640123996 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001055147 |
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| Protein GI | 126458869 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.219645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGT GGTCCGCGGC AGTTGGCTAC ATCTACCTCG GCCTCTTTCT ACTATTCCCC
CTCCTCTTTA TATTTTGGCA AGTGGTAGAG GGCGTAGCCG AGGTCTACAA GCTCGTGGCA
GACCCGTTCT ACGTAAACCT ATCTCCAGAC GCCTTCGCCA GCGCCGTGTA TATCAGAGAG
GGCAACCCGC CGACCCTCGT GGTGAGGGGG CCCGACCTCG GCGTCATATT CAACAGCCTG
TGGGTCGCCC TCACAGTCGC CGCCGTGGAC ACTGCCTTGG GATTCCTCCT GGCCTACGCG
TTGGCCAAGT ACGTGTTCCC CGGCAGAACT GCCCTCGGGC TGTTGGCCAC GGTGCCGCTC
ATAGTGATGC CCTTCGCCAC CGCCTACGCC GTTAGGAAGT TCCTAGACCC GCGGTGGGGG
ACCTTGAACT GGCTCCTCAA CGACGTCTTG GGCATCCCAC TCAAGGTGGA GATCTCGGGC
CTAGCCGCGG TGGCCCTCGT CCAATCCCTC ATGTATCTCC CAATAGCCTA TCTCAACATC
TACGCCGCGT TGACTAGGGT CGACCCCACG CTGGAGGAGG TGGCCAACAA CCTCGGCGCA
GACGAGCGGC GCGCTGTGCG AGACGTGGTG CTCCCCCTGG CCACCCCCGG ACTCGCCGCG
GCCTTCGTCC TAGTGTTCAT CTTCGCCATA GACGACGTGG CGGCGCCCAT AATCTTCCAA
GACGACCCAG CGGCGAGGAA GCTCCTCTCC TACCAAGTGT ACTCCCGCTT CCTCGACCAG
CTGAGGGGGC AGATAAGCCC AACGGCGGCA TTCCTAGCCC TAGTACTCCT CACAATTGCC
GTCACCTCCT TCCTCGCCGT GCGGAAGTAC GTGGGGCTGA GGCAGTACGC CATGTTGATA
CGCCAGCTAA GGCCGAGGAT ATACAAGCCG GGCCCGCTGG GGAAAGTTCT AATATACGCA
GTGGCCTTCC CCCTGGCGCT TGTGGCGTCG GCCCCCCTCC TCGGCGCCAT TTCGCTAGTG
TTCGCGGAGA GGTGGACCAC GTCGCCGCTG CCCGAGTCGC CCAGCCTCTC CACCGCCGCC
GAGAGGCTCG CCGCAGTTTT TCAAAACGAG CTGTTTGTAA GAGGGATTTG GAACACTGTG
ATATACGGCG TCTCCGCCAC TCTGATAATG GTGGCGATAG GCGTGGCCGT GGCCATCGCC
GCGGCTAGGC TGAGGGGGCC CGCCGCAGAT GCGCTAGACG CCTTGGCCAC AGTGCCCATA
GCTGTGCCAG GCCTCGTGGT GGCCTACGCC TACTTCCTCA CCTCCCTAGC CGCCGTCAGC
TGGCTTAGGC CAATAAGCCC GGCGCTGGCG GACCTCCTAG ACCCGTTGAG GCACCCAGAG
TTCTACCTAG TCGTGGGCTA CTCCGTGAGG AAGCTCCCCT TCGTGGTGAG GAGCATATAC
GCGGGGATGC AGCAGATACA CCCCTCCATG GAGGAGGTGG CCTTAAACCT GGGGGACAGC
TACTGGGGCG TGGTTAGGAA GATCCTACTG CCCCTACTGG TGACAAACGT GATAAGCGGC
GCCTTGATAG GCTTTGTGTA TGTCACAAGC GAGGTCTCCC TGAGCATAAC CCTTGGAGTG
CTCAAAGGCG TGGGAAGAGA CACGGCCATG CCCATAACCG CCTTCATGCG CGAGCGTTTT
GAAAGCGGGC TATACGGCGT ACAAGACGCG GCTACCCTAG GCCTCCTCCT CGTCTTAATC
CAAGTCACAG CTATCACATT AACCACGAGA GTGCTCAAGA CGAGATACGG CTTCGTCCTT
TAG
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| Protein sequence | MIKWSAAVGY IYLGLFLLFP LLFIFWQVVE GVAEVYKLVA DPFYVNLSPD AFASAVYIRE
GNPPTLVVRG PDLGVIFNSL WVALTVAAVD TALGFLLAYA LAKYVFPGRT ALGLLATVPL
IVMPFATAYA VRKFLDPRWG TLNWLLNDVL GIPLKVEISG LAAVALVQSL MYLPIAYLNI
YAALTRVDPT LEEVANNLGA DERRAVRDVV LPLATPGLAA AFVLVFIFAI DDVAAPIIFQ
DDPAARKLLS YQVYSRFLDQ LRGQISPTAA FLALVLLTIA VTSFLAVRKY VGLRQYAMLI
RQLRPRIYKP GPLGKVLIYA VAFPLALVAS APLLGAISLV FAERWTTSPL PESPSLSTAA
ERLAAVFQNE LFVRGIWNTV IYGVSATLIM VAIGVAVAIA AARLRGPAAD ALDALATVPI
AVPGLVVAYA YFLTSLAAVS WLRPISPALA DLLDPLRHPE FYLVVGYSVR KLPFVVRSIY
AGMQQIHPSM EEVALNLGDS YWGVVRKILL PLLVTNVISG ALIGFVYVTS EVSLSITLGV
LKGVGRDTAM PITAFMRERF ESGLYGVQDA ATLGLLLVLI QVTAITLTTR VLKTRYGFVL
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