More than 300 homologs were found in PanDaTox collection
for query gene Oant_4761 on replicon NC_009670
Organism: Ochrobactrum anthropi ATCC 49188



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009670  Oant_4761  histone family protein DNA-binding protein  100 
 
 
92 aa  180  6e-45  Ochrobactrum anthropi ATCC 49188  Bacteria  hitchhiker  0.00588654  n/a   
 
 
-
 
NC_011984  Avi_9178  HNS-type DNA binding protein  91.21 
 
 
92 aa  165  2e-40  Agrobacterium vitis S4  Bacteria  normal  0.654708  n/a   
 
 
-
 
NC_011982  Avi_8027  HNS-type DNA binding protein  84.78 
 
 
92 aa  159  1e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6198  histone family protein DNA-binding protein  76.92 
 
 
92 aa  143  8.000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0309609  normal  0.013935 
 
 
-
 
NC_012853  Rleg_5718  histone family protein DNA-binding protein  74.73 
 
 
92 aa  138  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0779514  normal  0.621503 
 
 
-
 
NC_009475  BBta_p0009  histone-like DNA-binding protein  67.39 
 
 
130 aa  133  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.101373 
 
 
-
 
NC_011981  Avi_7042  HNS-type DNA binding protein  70.33 
 
 
92 aa  129  1.0000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  0.815664  n/a   
 
 
-
 
NC_011982  Avi_8123  HNS-type DNA binding protein  69.23 
 
 
92 aa  128  3e-29  Agrobacterium vitis S4  Bacteria  normal  0.029087  n/a   
 
 
-
 
NC_008242  Meso_4234  histone-like DNA-binding protein  71.43 
 
 
92 aa  119  9.999999999999999e-27  Chelativorans sp. BNC1  Bacteria  normal  0.482395  n/a   
 
 
-
 
NC_010335  Caul_5182  histone family protein DNA-binding protein  56.04 
 
 
92 aa  105  2e-22  Caulobacter sp. K31  Bacteria  normal  0.022675  normal 
 
 
-
 
NC_010338  Caul_1806  histone family protein DNA-binding protein  52.75 
 
 
92 aa  104  5e-22  Caulobacter sp. K31  Bacteria  normal  normal  0.109803 
 
 
-
 
NC_010338  Caul_2219  histone family protein DNA-binding protein  51.65 
 
 
92 aa  100  9e-21  Caulobacter sp. K31  Bacteria  normal  0.789532  normal  0.340698 
 
 
-
 
NC_009511  Swit_2320  histone family protein DNA-binding protein  54.55 
 
 
91 aa  100  9e-21  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0313993 
 
 
-
 
NC_007794  Saro_1217  histone-like DNA-binding protein  57.47 
 
 
91 aa  93.2  1e-18  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.778852  n/a   
 
 
-
 
NC_008048  Sala_2632  histone-like DNA-binding protein  52.22 
 
 
91 aa  92  2e-18  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009507  Swit_5141  histone family protein DNA-binding protein  51.09 
 
 
92 aa  86.3  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.467193 
 
 
-
 
NC_009436  Ent638_0213  transcriptional regulator HU subunit alpha  50.59 
 
 
90 aa  77.4  0.00000000000006  Enterobacter sp. 638  Bacteria  hitchhiker  0.00855152  normal  0.0112419 
 
 
-
 
NC_010465  YPK_0354  transcriptional regulator HU subunit alpha  50.59 
 
 
91 aa  77  0.00000000000009  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.224811  n/a   
 
 
-
 
NC_009708  YpsIP31758_3846  transcriptional regulator HU subunit alpha  50.59 
 
 
91 aa  77  0.00000000000009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.219693  n/a   
 
 
-
 
NC_010159  YpAngola_A0462  transcriptional regulator HU subunit alpha  50.59 
 
 
91 aa  77  0.00000000000009  Yersinia pestis Angola  Bacteria  normal  0.082883  hitchhiker  0.00197429 
 
 
-
 
NC_010577  XfasM23_0470  histone family protein DNA-binding protein  44.71 
 
 
94 aa  75.9  0.0000000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02474  DNA-binding protein HU  45.35 
 
 
90 aa  75.5  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0226  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  75.1  0.0000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0975648  n/a   
 
 
-
 
NC_012917  PC1_0222  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  75.1  0.0000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.390191  n/a   
 
 
-
 
NC_011205  SeD_A4577  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  74.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.511964 
 
 
-
 
NC_011094  SeSA_A4381  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  74.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.842423 
 
 
-
 
NC_011149  SeAg_B4414  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  74.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.18011  n/a   
 
 
-
 
NC_011080  SNSL254_A4503  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  74.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0164141 
 
 
-
 
NC_011083  SeHA_C4501  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  74.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.358882  normal  0.0495174 
 
 
-
 
CP001509  ECD_03877  HU, DNA-binding transcriptional regulator, alpha subunit  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli BL21(DE3)  Bacteria  normal  0.380115  n/a   
 
 
-
 
CP001637  EcDH1_3994  histone family protein DNA-binding protein  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5469  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.129609  normal 
 
 
-
 
NC_010658  SbBS512_E4491  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Shigella boydii CDC 3083-94  Bacteria  normal  0.0852675  n/a   
 
 
-
 
NC_012912  Dd1591_3864  transcriptional regulator HU subunit alpha  48.24 
 
 
90 aa  73.9  0.0000000000007  Dickeya zeae Ech1591  Bacteria  normal  0.78216  n/a   
 
 
-
 
NC_009801  EcE24377A_4543  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli E24377A  Bacteria  normal  0.440082  n/a   
 
 
-
 
NC_009800  EcHS_A4234  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4025  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0158227 
 
 
-
 
NC_012892  B21_03830  hypothetical protein  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli BL21  Bacteria  normal  0.485291  n/a   
 
 
-
 
NC_010498  EcSMS35_4448  transcriptional regulator HU subunit alpha  49.41 
 
 
90 aa  73.9  0.0000000000007  Escherichia coli SMS-3-5  Bacteria  normal  0.302586  hitchhiker  0.00101008 
 
 
-
 
NC_012880  Dd703_3710  transcriptional regulator HU subunit alpha  48.24 
 
 
90 aa  73.6  0.0000000000008  Dickeya dadantii Ech703  Bacteria  normal  0.273113  n/a   
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_010513  Xfasm12_0532  histone-like protein  43.53 
 
 
94 aa  73.6  0.000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_006055  Mfl201  histone-like DNA-binding protein  42.7 
 
 
90 aa  72.8  0.000000000001  Mesoplasma florum L1  Bacteria  normal  0.25153  n/a   
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal 
 
 
-
 
NC_010501  PputW619_1745  histone family protein DNA-binding protein  44.83 
 
 
90 aa  73.2  0.000000000001  Pseudomonas putida W619  Bacteria  normal  0.693876  hitchhiker  0.00044049 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  42.53 
 
 
94 aa  72.8  0.000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_009832  Spro_0290  transcriptional regulator HU subunit alpha  48.24 
 
 
90 aa  73.2  0.000000000001  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0031706  hitchhiker  0.00995537 
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  43.33 
 
 
91 aa  73.2  0.000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  47.13 
 
 
90 aa  73.2  0.000000000001  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_013739  Cwoe_1870  histone family protein DNA-binding protein  42.22 
 
 
91 aa  72.8  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0130937 
 
 
-
 
NC_003295  RSc1714  DNA-binding protein HU-beta  40.7 
 
 
90 aa  72  0.000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.606946  normal  0.0324854 
 
 
-
 
NC_008309  HS_1538  DNA-binding protein HU  45.98 
 
 
91 aa  72  0.000000000003  Haemophilus somnus 129PT  Bacteria  unclonable  0.0000000000676058  n/a   
 
 
-
 
NC_010506  Swoo_3110  histone family protein DNA-binding protein  44.83 
 
 
90 aa  71.6  0.000000000004  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000105676  hitchhiker  0.00000299463 
 
 
-
 
NC_008789  Hhal_1584  histone family protein DNA-binding protein  41.86 
 
 
91 aa  71.2  0.000000000004  Halorhodospira halophila SL1  Bacteria  normal  0.532726  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  40.23 
 
 
90 aa  71.2  0.000000000005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  45.35 
 
 
90 aa  70.9  0.000000000006  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  40.23 
 
 
91 aa  70.9  0.000000000006  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  40.23 
 
 
91 aa  70.9  0.000000000006  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_009832  Spro_1098  histone family protein DNA-binding protein  42.53 
 
 
101 aa  70.9  0.000000000007  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00970005  hitchhiker  0.00000236625 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  44.83 
 
 
90 aa  70.5  0.000000000008  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal 
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  39.08 
 
 
90 aa  70.1  0.000000000009  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  44.83 
 
 
90 aa  69.7  0.00000000001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal 
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  44.32 
 
 
91 aa  70.1  0.00000000001  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  41.11 
 
 
91 aa  70.1  0.00000000001  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  43.68 
 
 
90 aa  69.3  0.00000000002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  43.68 
 
 
90 aa  68.9  0.00000000002  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  43.53 
 
 
90 aa  68.9  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  43.53 
 
 
90 aa  68.9  0.00000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  43.68 
 
 
90 aa  68.9  0.00000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_008532  STER_1175  histone-like DNA-binding protein  42.22 
 
 
91 aa  68.9  0.00000000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000000211181  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  42.35 
 
 
90 aa  68.2  0.00000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  42.53 
 
 
90 aa  68.6  0.00000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  43.68 
 
 
90 aa  68.6  0.00000000003  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  41.38 
 
 
90 aa  68.6  0.00000000003  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  43.82 
 
 
91 aa  68.2  0.00000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  38.89 
 
 
91 aa  68.6  0.00000000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  41.86 
 
 
91 aa  68.6  0.00000000003  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal 
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  43.9 
 
 
91 aa  68.6  0.00000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  41.38 
 
 
91 aa  68.2  0.00000000004  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_009436  Ent638_0907  transcriptional regulator HU subunit beta  41.38 
 
 
90 aa  68.2  0.00000000004  Enterobacter sp. 638  Bacteria  normal  0.0908162  normal 
 
 
-
 
NC_009457  VC0395_A2650  DNA-binding protein HU  44.71 
 
 
90 aa  67.8  0.00000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009140  SNSL254_pSN254_0022  DNA-binding protein HU  40.7 
 
 
90 aa  68.2  0.00000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00102315  hitchhiker  0.000567997 
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  41.38 
 
 
90 aa  67.8  0.00000000005  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  41.38 
 
 
90 aa  67.8  0.00000000005  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>