Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2505 |
Symbol | |
ID | 4921351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2946482 |
End bp | 2946754 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640164096 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_001094630 |
Protein GI | 127513433 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000791734 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.581146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAT CTGAACTAAT CGAGAAAATC GCTTCTGGTG CTGATATCTC TAAAGCGGCC GCTGGTCGTG CTCTAGATTC TTTTATTTCT GCTGTGACTG ATGGCTTAAA AGATGGCGAT AAAATCTCTC TAGTTGGTTT TGGTACTTTT GAAGTGCGTC AACGCGCAGA GCGTACTGGT CGCAACCCAC AGACTGGTAA AGAGATCAAG ATTGCTGCAG CAAACATTCC AGCATTCAAG GCCGGTAAAG CACTTAAAGA CGCTGTAAAC TAA
|
Protein sequence | MNKSELIEKI ASGADISKAA AGRALDSFIS AVTDGLKDGD KISLVGFGTF EVRQRAERTG RNPQTGKEIK IAAANIPAFK AGKALKDAVN
|
| |