| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8123 |
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| Symbol | |
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| ID | 7365210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 83145 |
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| End bp | 83423 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641747 |
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| Product | HNS-type DNA binding protein |
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| Protein accession | YP_002540044 |
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| Protein GI | 222080181 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.029087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA CCAATGAAAT CGCCGACAAG ATTGCAGCCG ACAACGGCCT GACGAAGGTT
CAGGCAAAGG GCATTGTCGA GGCCGTGTTC CAGGCCATCG CCGATGCCGC AGGCTCCGAC
GCTGAAACCT CAATCCCAGG CTTCGGAAAG TTTAAAGTGA AGGCATCGCC TGAGCGTGAG
GGTCGCAATC CTGCGACCGG AGAAAAGATG ACCGTTGCGG CTTCGAAGAA GCTGACCTTC
GCGCCTGCCA AGGCGCTCAA GGATGCACTG AACAAGTGA
|
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| Protein sequence | MTTTNEIADK IAADNGLTKV QAKGIVEAVF QAIADAAGSD AETSIPGFGK FKVKASPERE
GRNPATGEKM TVAASKKLTF APAKALKDAL NK
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