| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2650 |
|---|
| Symbol | hupA |
|---|
| ID | 5137742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2803566 |
|---|
| End bp | 2803838 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640534098 |
|---|
| Product | DNA-binding protein HU |
|---|
| Protein accession | YP_001218528 |
|---|
| Protein GI | 147674530 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA CCCAATTGAT CGACTTTATC GCAGAGAAAG CGGACCTGAC TAAAGTGCAA
GCGAAAGCAG CTCTTGAAGC GACTCTGGGT GCGGTTGAAG GTGCTCTGAA AGACGGCGAC
CAAGTACAAC TGATTGGTTT TGGTACATTC AAAGTTAATC ATCGTTCTGC TCGTACTGGC
CGTAATCCAA AGACCGGTGA AGAGATCAAA ATTGCGGCAG CTAACGTTCC TGCATTCGTA
GCAGGTAAAG CGCTGAAAGA CGCGATCAAG TAA
|
|---|
| Protein sequence | MNKTQLIDFI AEKADLTKVQ AKAALEATLG AVEGALKDGD QVQLIGFGTF KVNHRSARTG
RNPKTGEEIK IAAANVPAFV AGKALKDAIK
|
|---|
| |