Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9178 |
Symbol | |
ID | 7367721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 140982 |
End bp | 141260 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643644366 |
Product | HNS-type DNA binding protein |
Protein accession | YP_002542663 |
Protein GI | 222083260 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.654708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGA CCAACGAAAT CGCCGACAAG ATCGCAGCCG AACAGAACCT CCCCAAGGCG CAGGCCAAGA CGATCGTCGA AAGCGTCTTT AAACAGATCA CCGAAGCGGC GCTTGCTGGC GCTGAAACGT CGATACCATC GTTTGGAAAG TTTAAGCTGA AGGACACTCC GGAGCGCGAG GGACGCAATC CGGCGACCGG CGCGACGATC AAGATCGCGG CGTCGAAGAA GCTGACGTTT ACACCCGGCA AGGCGGTCAA GGACGCGCTG AACGGCTGA
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Protein sequence | MTTTNEIADK IAAEQNLPKA QAKTIVESVF KQITEAALAG AETSIPSFGK FKLKDTPERE GRNPATGATI KIAASKKLTF TPGKAVKDAL NG
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