| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8027 |
|---|
| Symbol | |
|---|
| ID | 7365154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011982 |
|---|
| Strand | - |
|---|
| Start bp | 27093 |
|---|
| End bp | 27371 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643641705 |
|---|
| Product | HNS-type DNA binding protein |
|---|
| Protein accession | YP_002540002 |
|---|
| Protein GI | 222080139 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CAAACGAAAT TGCTGACAAG ATCGCATCCG AGCAGAGCCT AACAAGGGCG
CAGGCCAAGA CCATTGTCGA AAGCGTCTTT AAACATATCA CTGATGCTGC TCTTGCCTGC
GCGGAAACGT CGATTCCGTC GTTCGGCAAA TTCAAAATCA AGGACACTCC GGAACGCCAA
GGCCGCAATC CGGCCACGGG CGCAACGATC AAGATCGCCG CATCGAAGAA GCTGACCTTT
ACACCCGGCA AGGCCGTCAA GGATGCGCTG AACGCATGA
|
|---|
| Protein sequence | MTTTNEIADK IASEQSLTRA QAKTIVESVF KHITDAALAC AETSIPSFGK FKIKDTPERQ
GRNPATGATI KIAASKKLTF TPGKAVKDAL NA
|
|---|
| |