Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1544 |
Symbol | |
ID | 5613686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1844772 |
End bp | 1845044 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640932413 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_001473283 |
Protein GI | 157374683 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000007734 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000745392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAAT CTGAACTAAT CGAGAAAATC GCTTCTGGTG CTGACATTTC TAAAGCCGCT GCTGGCCGTG CATTAGATTC TTTCATTGGA GCTGTAACTG ACGGCTTAAA AGAAGGCGAT AAGATTTCTC TTGTTGGTTT TGGTACTTTC GAAGTGCGTC AACGCGCTGA GCGTACTGGT CGCAACCCAC AGACGGGTAA AGAGATCAAA ATCGCAGCAG CTAATATTCC TGCATTCAAA GCAGGTAAAG CTCTGAAAGA CGCTGTAAAC TAA
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Protein sequence | MNKSELIEKI ASGADISKAA AGRALDSFIG AVTDGLKEGD KISLVGFGTF EVRQRAERTG RNPQTGKEIK IAAANIPAFK AGKALKDAVN
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