| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7042 |
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| Symbol | hupT |
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| ID | 7380237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 40213 |
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| End bp | 40491 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641185 |
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| Product | HNS-type DNA binding protein |
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| Protein accession | YP_002539482 |
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| Protein GI | 222102443 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.815664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA CCAATGAAAT CGCCGACAAG ATCGCCGCCA ACAACGGCCT GACAAAGGTT
CAGGCCAAGG GCATCGTCGA ATCCGTGTTC AAGGCCATCG CCGACGCCGC AGGCTCCGAC
GCGGAAACGT CAATCCCCGG TTTCGGCAAA TTTAAGGTGA AAACATCACC TGAGCGCGAG
GGTCGCAATC CCGCGACCGG AGAAAAAATG ACTGTTGCAG CTTCGAAGAA GCTGACTTTC
GCGCCTGCCA AGGCCCTCAA GGATGCACTG AACAAGTGA
|
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| Protein sequence | MTTTNEIADK IAANNGLTKV QAKGIVESVF KAIADAAGSD AETSIPGFGK FKVKTSPERE
GRNPATGEKM TVAASKKLTF APAKALKDAL NK
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