| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4577 |
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| Symbol | hupA |
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| ID | 6873151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 4417145 |
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| End bp | 4417417 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642787484 |
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| Product | transcriptional regulator HU subunit alpha |
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| Protein accession | YP_002218086 |
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| Protein GI | 198243874 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.511964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGA CTCAACTGAT TGATGTAATT GCAGACAAAG CAGAACTGTC CAAAACCCAG
GCTAAAGCTG CTCTGGAATC CACTCTGGCT GCTATTACTG AGTCTCTGAA AGAAGGCGAT
GCTGTACAAC TGGTTGGTTT CGGTACCTTC AAAGTGAACC ACCGTGCTGA GCGCACTGGC
CGTAACCCAC AGACCGGTAA AGAAATCAAA ATCGCCGCCG CTAACGTACC GGCGTTTGTT
TCTGGTAAAG CTCTGAAAGA CGCAGTTAAG TAA
|
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| Protein sequence | MNKTQLIDVI ADKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG
RNPQTGKEIK IAAANVPAFV SGKALKDAVK
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