More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_2903 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  100 
 
 
91 aa  182  1.0000000000000001e-45  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  100 
 
 
91 aa  182  1.0000000000000001e-45  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  74.44 
 
 
91 aa  136  7.999999999999999e-32  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal 
 
 
-
 
NC_008576  Mmc1_2054  histone family protein DNA-binding protein  62.64 
 
 
91 aa  117  4.9999999999999996e-26  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00333504  normal  0.0104655 
 
 
-
 
NC_008576  Mmc1_2824  nucleoid protein Hbs  62.64 
 
 
91 aa  117  4.9999999999999996e-26  Magnetococcus sp. MC-1  Bacteria  normal  0.669113  normal 
 
 
-
 
NC_008576  Mmc1_0914  HU family DNA-binding protein  58.24 
 
 
91 aa  114  6e-25  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  59.55 
 
 
90 aa  105  1e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  59.55 
 
 
90 aa  105  2e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  58.43 
 
 
90 aa  104  4e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  58.43 
 
 
90 aa  103  6e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  57.3 
 
 
90 aa  103  8e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  57.78 
 
 
95 aa  102  1e-21  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  58.43 
 
 
90 aa  102  2e-21  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  58.43 
 
 
90 aa  102  2e-21  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  56.67 
 
 
91 aa  101  3e-21  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_008309  HS_1538  DNA-binding protein HU  60 
 
 
91 aa  101  3e-21  Haemophilus somnus 129PT  Bacteria  unclonable  0.0000000000676058  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  55.06 
 
 
91 aa  101  4e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_012791  Vapar_4266  histone family protein DNA-binding protein  56.67 
 
 
93 aa  100  6e-21  Variovorax paradoxus S110  Bacteria  normal  0.598481  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  56.18 
 
 
90 aa  100  7e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  56.18 
 
 
90 aa  100  8e-21  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  56.18 
 
 
90 aa  100  8e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011775  BCG9842_0074  DNA-binding protein HU  59.3 
 
 
90 aa  99.4  2e-20  Bacillus cereus G9842  Bacteria  unclonable  0.00000000000481156  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  52.22 
 
 
90 aa  99.4  2e-20  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  54.44 
 
 
90 aa  99.4  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  56.18 
 
 
90 aa  99.4  2e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  55.56 
 
 
91 aa  98.6  3e-20  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_008345  Sfri_3532  histone family protein DNA-binding protein  52.22 
 
 
90 aa  98.2  3e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  54.44 
 
 
90 aa  98.2  4e-20  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_010676  Bphyt_4682  histone family protein DNA-binding protein  56.67 
 
 
92 aa  97.4  5e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0505442  normal 
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  56.67 
 
 
90 aa  97.8  5e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_007952  Bxe_B0956  DNA-binding protein HU-alpha  56.67 
 
 
92 aa  97.4  5e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.667832  normal 
 
 
-
 
NC_009484  Acry_0920  histone family protein DNA-binding protein  59.26 
 
 
87 aa  97.4  5e-20  Acidiphilium cryptum JF-5  Bacteria  normal  0.417728  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  55.06 
 
 
90 aa  97.4  6e-20  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  55.06 
 
 
90 aa  97.4  6e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  55.06 
 
 
90 aa  97.4  6e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  55.56 
 
 
90 aa  96.7  9e-20  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  55.06 
 
 
90 aa  96.7  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  52.22 
 
 
90 aa  96.7  1e-19  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  57.3 
 
 
90 aa  96.3  1e-19  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  55.06 
 
 
90 aa  96.7  1e-19  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  52.75 
 
 
94 aa  95.5  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  52.22 
 
 
90 aa  95.5  2e-19  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  57.3 
 
 
91 aa  95.9  2e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  51.11 
 
 
91 aa  95.5  2e-19  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  51.11 
 
 
90 aa  95.5  2e-19  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  53.93 
 
 
90 aa  95.5  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  52.22 
 
 
90 aa  95.9  2e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  53.33 
 
 
90 aa  95.9  2e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  53.93 
 
 
90 aa  95.5  2e-19  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  55.06 
 
 
91 aa  95.1  3e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  54.44 
 
 
90 aa  95.1  3e-19  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_007492  Pfl01_5600  nucleoid protein HU alpha subunit  51.11 
 
 
91 aa  94.7  4e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.375895  normal 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  54.44 
 
 
90 aa  94.7  4e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  50 
 
 
90 aa  94.4  5e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1873  HU family DNA-binding protein  51.11 
 
 
91 aa  94.4  5e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.972501  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  51.65 
 
 
96 aa  94.4  5e-19  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal 
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  51.11 
 
 
91 aa  94.4  5e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  53.26 
 
 
92 aa  94  6e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal 
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  52.81 
 
 
94 aa  94  6e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  51.11 
 
 
90 aa  94.4  6e-19  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal 
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  54.12 
 
 
91 aa  94  6e-19  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_009439  Pmen_4401  nucleoid protein HU alpha subunit  50 
 
 
90 aa  94  7e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.177499 
 
 
-
 
NC_011312  VSAL_I2846  DNA-binding protein HU-alpha  52.22 
 
 
90 aa  94  7e-19  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00368421  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  50 
 
 
90 aa  94  7e-19  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  50 
 
 
90 aa  93.6  8e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  51.65 
 
 
91 aa  93.6  9e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  51.11 
 
 
94 aa  93.2  1e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_008740  Maqu_3758  histone family protein DNA-binding protein  53.93 
 
 
90 aa  93.2  1e-18  Marinobacter aquaeolei VT8  Bacteria  normal  0.639339  n/a   
 
 
-
 
NC_011992  Dtpsy_1187  histone family protein DNA-binding protein  51.11 
 
 
90 aa  93.2  1e-18  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2621  histone family protein DNA-binding protein  51.11 
 
 
90 aa  93.2  1e-18  Acidovorax sp. JS42  Bacteria  normal  0.348082  normal  0.0833374 
 
 
-
 
NC_007404  Tbd_1674  histone-like DNA-binding protein  50 
 
 
90 aa  93.2  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.171237 
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  50.55 
 
 
91 aa  92.8  1e-18  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_3249  histone-like DNA-binding protein  49.44 
 
 
90 aa  92.8  1e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007972  Rmet_6397  DNA-binding protein Hu-beta  51.09 
 
 
144 aa  93.2  1e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_43920  histone-like DNA-binding protein  52.22 
 
 
90 aa  92.8  1e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  56.47 
 
 
91 aa  93.2  1e-18  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  50 
 
 
90 aa  93.2  1e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
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