| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0462 |
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| Symbol | hupA |
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| ID | 5798926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 483382 |
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| End bp | 483657 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641338468 |
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| Product | transcriptional regulator HU subunit alpha |
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| Protein accession | YP_001605067 |
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| Protein GI | 162418414 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.082883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00197429 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATAAGA CTCAACTGAT TGACGTAATC GCGGACAAAG CGGACCTTTC TAAGGTACAA
GCTAAAGCTG CTCTGGAATC CACACTGGCT GCAATTACCG AATCTCTGAA AGAAGGGGAT
CCAGTACAAT TGGTTGGTTT TGGTACCTTC AAAGTAAACC ATCGTAATGA GCGCACTGGC
CGCAACCCAC AAACGGGTAA AGAAATCAAA ATTGCTGCCG CTAATGTACC CGCGTTTGTT
TCTGGTAAGG CACTGAAAGA CGCTGTTAAG TCATAG
|
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| Protein sequence | MNKTQLIDVI ADKADLSKVQ AKAALESTLA AITESLKEGD PVQLVGFGTF KVNHRNERTG
RNPQTGKEIK IAAANVPAFV SGKALKDAVK S
|
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