Gene EcSMS35_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0483 
SymbolhupB 
ID6146438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp489753 
End bp490025 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content49% 
IMG OID641615377 
Producttranscriptional regulator HU subunit beta 
Protein accessionYP_001742584 
Protein GI170681712 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000219434 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAT CTCAATTGAT CGACAAGATT GCTGCAGGGG CTGATATCTC TAAAGCTGCG 
GCTGGCCGTG CGTTAGATGC TATTATTGCT TCCGTAACTG AATCTCTGAA AGAAGGGGAT
GATGTAGCAC TGGTAGGTTT TGGTACTTTT GCCGTTAAAG AGCGTGCTGC CCGTACTGGC
CGCAACCCGC AGACCGGTAA AGAGATCACC ATCGCTGCCG CTAAAGTACC GAGCTTCCGT
GCAGGTAAAG CACTGAAAGA CGCGGTAAAC TAA
 
Protein sequence
MNKSQLIDKI AAGADISKAA AGRALDAIIA SVTESLKEGD DVALVGFGTF AVKERAARTG 
RNPQTGKEIT IAAAKVPSFR AGKALKDAVN