Gene PC1_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0222 
Symbol 
ID8131130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp261833 
End bp262105 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content44% 
IMG OID644863498 
Producttranscriptional regulator HU subunit alpha 
Protein accessionYP_003015818 
Protein GI253686628 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA CTCAACTGAT TGATGTAATT GCGGACAAAG CTGATCTGTC AAAAGCACAG 
GCTAAAGCAG CTCTGGAATC AACTCTGGCG GCAATTACCG AGTCTCTGAA AGAAGGTGAT
GCAGTACAAT TAGTTGGTTT TGGTACGTTT AAAGTCAACC ATCGTAATGA GCGCACTGGC
CGCAACCCAC AAACCGGTAA AGAAATCAAA ATTGCTGCTG CCAACGTGCC AGCGTTTGTT
TCTGGCAAGG CTCTGAAAGA CGCTGTTAAA TAA
 
Protein sequence
MNKTQLIDVI ADKADLSKAQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRNERTG 
RNPQTGKEIK IAAANVPAFV SGKALKDAVK