Gene Swoo_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3110 
Symbol 
ID6117426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3809551 
End bp3809823 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content45% 
IMG OID641634652 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001761476 
Protein GI170727450 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000105676 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000299463 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAT CTGAACTAAT CGAGAAAATC GCTTCTGGTG CTGACATTTC TAAAGCCGCT 
GCTGGCCGTG CATTAGATTC TTTCATTGAA GCAGTTACTG ACGGCTTAAA AGATGGCGAT
AAGATTTCTC TTGTTGGTTT TGGTACTTTC GAAGTGCGTC AACGCGCAGA GCGTACTGGT
CGCAACCCAC AAACGGGTGC TGAGATCAAG ATCGCTGCAG CTAACATTCC TGCATTCAAA
GCAGGTAAAG CTCTGAAAGA CGCTGTAAAC TAA
 
Protein sequence
MNKSELIEKI ASGADISKAA AGRALDSFIE AVTDGLKDGD KISLVGFGTF EVRQRAERTG 
RNPQTGAEIK IAAANIPAFK AGKALKDAVN