| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0532 |
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| Symbol | hupB |
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| ID | 3103464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 548430 |
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| End bp | 548702 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637169745 |
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| Product | DNA-binding protein HU-beta |
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| Protein accession | YP_113051 |
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| Protein GI | 53805229 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00043104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAG CGGAACTGAT TGAAGCCATC GCCGATGCGG CCAATCTCAC GAAGGCCGAT
GCGGGGCGTG CTCTGGATGC AGTGATCGAC GCCATTACCG ATGCGTTGAA GAAAGGCGAT
ACGGTCTCGC TGGTCGGGTT CGGCTCGTTC GCGGTCAAGG AGCGTGCAGA GCGTCAGGGG
CGAAATCCGC AGACGGGCGA CAGCATCACC ATCAAGGCTG CGAAAATTCC GTCATTCAAG
TGTGGCAAAG CGCTGAAAGA TGCTGTAAAC TAG
|
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| Protein sequence | MNKAELIEAI ADAANLTKAD AGRALDAVID AITDALKKGD TVSLVGFGSF AVKERAERQG
RNPQTGDSIT IKAAKIPSFK CGKALKDAVN
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