More than 300 homologs were found in PanDaTox collection
for query gene Hhal_1584 on replicon NC_008789
Organism: Halorhodospira halophila SL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_1584  histone family protein DNA-binding protein  100 
 
 
91 aa  181  2.0000000000000003e-45  Halorhodospira halophila SL1  Bacteria  normal  0.532726  n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  52.22 
 
 
94 aa  93.6  9e-19  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_008009  Acid345_4704  histone-like DNA-binding protein  49.45 
 
 
93 aa  92.8  2e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.833222 
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  55.68 
 
 
91 aa  90.9  5e-18  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  54.65 
 
 
90 aa  89.4  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  51.11 
 
 
91 aa  88.6  3e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1870  histone family protein DNA-binding protein  51.69 
 
 
91 aa  88.2  4e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0130937 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  52.81 
 
 
90 aa  87  8e-17  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  50.56 
 
 
91 aa  85.9  2e-16  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  54.95 
 
 
91 aa  85.9  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  51.69 
 
 
90 aa  85.1  3e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  51.14 
 
 
91 aa  85.1  3e-16  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  52.27 
 
 
91 aa  84.3  5e-16  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  51.69 
 
 
90 aa  83.6  8e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  51.69 
 
 
90 aa  83.6  8e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  51.69 
 
 
90 aa  83.6  8e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  47.06 
 
 
90 aa  83.2  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_008607  Ppro_3754  histone family protein DNA-binding protein  45.56 
 
 
101 aa  82.4  0.000000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.159868  n/a   
 
 
-
 
NC_007498  Pcar_1424  integration host factor, alpha subunit  43.96 
 
 
93 aa  82.4  0.000000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000184784  n/a   
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  49.44 
 
 
91 aa  82  0.000000000000002  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_009380  Strop_4159  histone family protein DNA-binding protein  48.35 
 
 
91 aa  82  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_008532  STER_1175  histone-like DNA-binding protein  53.41 
 
 
91 aa  82.4  0.000000000000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000000211181  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  51.69 
 
 
90 aa  82.4  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_002939  GSU2120  integration host factor, alpha subunit  42.22 
 
 
91 aa  81.6  0.000000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1090  histone family protein DNA-binding protein  42.22 
 
 
90 aa  81.6  0.000000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  48.31 
 
 
91 aa  82  0.000000000000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2356  histone family protein DNA-binding protein  44.44 
 
 
94 aa  82  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1872  histone family protein DNA-binding protein  44.44 
 
 
94 aa  81.6  0.000000000000003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.0000425439  n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  50 
 
 
90 aa  82  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_008609  Ppro_2302  histone family protein DNA-binding protein  42.22 
 
 
97 aa  81.3  0.000000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3445  hypothetical protein  46.91 
 
 
106 aa  81.3  0.000000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0106732  normal  0.0926246 
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  50 
 
 
91 aa  80.9  0.000000000000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1533  histone family protein DNA-binding protein  45.56 
 
 
90 aa  80.9  0.000000000000006  Ralstonia pickettii 12D  Bacteria  normal  0.753498  normal  0.353479 
 
 
-
 
NC_010814  Glov_0238  histone family protein DNA-binding protein  40.66 
 
 
91 aa  80.9  0.000000000000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2799  histone family protein DNA-binding protein  47.78 
 
 
91 aa  80.5  0.000000000000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1364  histone family protein DNA-binding protein  44.94 
 
 
90 aa  80.1  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3327  histone family protein DNA-binding protein  46.07 
 
 
94 aa  80.1  0.00000000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.372094  normal  0.0697763 
 
 
-
 
NC_009484  Acry_0920  histone family protein DNA-binding protein  50 
 
 
87 aa  79.7  0.00000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  0.417728  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  47.78 
 
 
90 aa  79.7  0.00000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  48.31 
 
 
91 aa  80.1  0.00000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  47.78 
 
 
90 aa  79.7  0.00000000000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_014230  CA2559_09623  probable DNA-binding protein HU  43.33 
 
 
90 aa  79.7  0.00000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.355669  n/a   
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  47.78 
 
 
90 aa  79.7  0.00000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  46.07 
 
 
90 aa  79.7  0.00000000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  46.67 
 
 
91 aa  79  0.00000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  44.94 
 
 
91 aa  79  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1731  integration host factor subunit alpha  47.78 
 
 
98 aa  79.3  0.00000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.074622  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  50.56 
 
 
95 aa  79  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_013422  Hneap_1314  integration host factor, alpha subunit  44.44 
 
 
100 aa  79  0.00000000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1866  histone family protein DNA-binding protein  44.44 
 
 
90 aa  79.3  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0187787  hitchhiker  0.00274705 
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  48.89 
 
 
96 aa  79.3  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal 
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  46.67 
 
 
91 aa  78.6  0.00000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1417  histone-like DNA-binding protein  43.33 
 
 
91 aa  78.6  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000053245  normal  0.466182 
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  46.67 
 
 
91 aa  78.6  0.00000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3619  histone-like DNA-binding protein  46.07 
 
 
94 aa  78.6  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2493  integration host factor subunit alpha  45.56 
 
 
98 aa  78.6  0.00000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.044668  n/a   
 
 
-
 
NC_008576  Mmc1_0914  HU family DNA-binding protein  46.67 
 
 
91 aa  78.2  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  39.56 
 
 
92 aa  78.6  0.00000000000003  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_010814  Glov_1918  histone family protein DNA-binding protein  43.96 
 
 
92 aa  78.2  0.00000000000004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000225021  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  45.56 
 
 
90 aa  78.2  0.00000000000004  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1956  nucleoid protein Hbs  43.33 
 
 
90 aa  78.2  0.00000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.582961  normal  0.45981 
 
 
-
 
NC_007908  Rfer_1565  histone-like DNA-binding protein  43.48 
 
 
103 aa  78.2  0.00000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3836  nucleoid protein Hbs  50 
 
 
91 aa  78.2  0.00000000000004  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00753337  normal 
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  45.56 
 
 
90 aa  78.2  0.00000000000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  42.7 
 
 
90 aa  78.2  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  47.19 
 
 
91 aa  78.2  0.00000000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1714  DNA-binding protein HU-beta  44.44 
 
 
90 aa  77.8  0.00000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.606946  normal  0.0324854 
 
 
-
 
NC_010506  Swoo_2068  integration host factor subunit alpha  43.96 
 
 
97 aa  77.8  0.00000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0298794  normal 
 
 
-
 
NC_011060  Ppha_1317  histone family protein DNA-binding protein  47.19 
 
 
91 aa  77.8  0.00000000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1994  integration host factor subunit alpha  44.44 
 
 
113 aa  77.4  0.00000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.110028  n/a   
 
 
-
 
NC_011080  SNSL254_A0500  transcriptional regulator HU subunit beta  46.67 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.332585  normal  0.0268714 
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  46.67 
 
 
91 aa  77.4  0.00000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_011083  SeHA_C0554  transcriptional regulator HU subunit beta  46.67 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00736621  normal 
 
 
-
 
NC_009675  Anae109_1886  integration host factor, alpha subunit  44.44 
 
 
99 aa  77.4  0.00000000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.067674 
 
 
-
 
NC_011094  SeSA_A0510  transcriptional regulator HU subunit beta  46.67 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0507646  normal 
 
 
-
 
NC_011205  SeD_A0493  transcriptional regulator HU subunit beta  46.67 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.107938  normal 
 
 
-
 
NC_007963  Csal_1805  integration host factor, alpha subunit  47.78 
 
 
102 aa  77.4  0.00000000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1909  integration host factor subunit alpha  44.44 
 
 
113 aa  77.4  0.00000000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0491  transcriptional regulator HU subunit beta  46.67 
 
 
90 aa  77.4  0.00000000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0126716  n/a   
 
 
-
 
NC_002939  GSU1521  integration host factor, alpha subunit  43.33 
 
 
91 aa  77.4  0.00000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  0.43426  n/a   
 
 
-
 
NC_010814  Glov_1888  histone family protein DNA-binding protein  41.11 
 
 
93 aa  77  0.00000000000007  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000630839  n/a   
 
 
-
 
NC_009727  CBUD_0508  DNA-binding protein HU  43.96 
 
 
94 aa  77  0.00000000000007  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.000000377509  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  43.33 
 
 
92 aa  77  0.00000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  43.33 
 
 
91 aa  77  0.00000000000007  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_007760  Adeh_1969  integration host factor subunit alpha  44.44 
 
 
113 aa  77  0.00000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0019696  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1641  DNA-binding protein HU  43.96 
 
 
94 aa  77  0.00000000000007  Coxiella burnetii RSA 331  Bacteria  unclonable  7.02248e-19  n/a   
 
 
-
 
NC_008345  Sfri_1710  integration host factor subunit alpha  44.44 
 
 
99 aa  77  0.00000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.707381  n/a   
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  44.44 
 
 
91 aa  77.4  0.00000000000007  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal 
 
 
-
 
NC_011146  Gbem_1996  histone family protein DNA-binding protein  42.22 
 
 
92 aa  77.4  0.00000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2224  histone family protein DNA-binding protein  42.22 
 
 
92 aa  77.4  0.00000000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000923552 
 
 
-
 
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