Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3051 |
Symbol | hupB |
ID | 5801524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3224874 |
End bp | 3225146 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641340888 |
Product | transcriptional regulator HU subunit beta |
Protein accession | YP_001607417 |
Protein GI | 162421829 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00488463 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATAAGT CACAACTGAT AGACAAAATT GCCGCAGGTG CTGATATTTC TAAAGCGGCC GCTGGGCGTG CGTTAGATGC AATTATTACT TCTGTTACTG AATCCTTGAA AGAAGGGGAT GATGTGGCTC TGGTTGGTTT TGGTACTTTT GCAGTACGTG AGCGTTCTGC ACGTACTGGC CGTAACCCGC AGACAGGTAA AGAAATTAGT ATTCCAGCCG CTAAAGTACC GGGTTTTCGT GCCGGTAAAG GCCTGAAAGA TGCAGTAAAC TGA
|
Protein sequence | MNKSQLIDKI AAGADISKAA AGRALDAIIT SVTESLKEGD DVALVGFGTF AVRERSARTG RNPQTGKEIS IPAAKVPGFR AGKGLKDAVN
|
| |