| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2493 |
|---|
| Symbol | ihfA |
|---|
| ID | 4174247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3025779 |
|---|
| End bp | 3026075 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638055509 |
|---|
| Product | integration host factor subunit alpha |
|---|
| Protein accession | YP_662063 |
|---|
| Protein GI | 109898808 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.044668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTAA CCAAAGCCGA AATGGCGGAA CATTTATTTG AAAAGTTGGG CATGAACAAG
AGAGATGCCA AAGATCTTGT TGAAGCATTT TTCGAAGAGG TCCGTGAGGC ATTGGAATCA
GGTGAGCAAG TTAAGCTATC TGGTTTTGGT AACTTTGATT TACGACAAAA GAGTGAACGA
CCAGGGCGCA ACCCTAAAAC GGGTGAAGAT ATCCCTATTA AGGCGAGACG CGTAGTCACA
TTTCGACCTG GTCAAAAGCT CAAAAGCCGC GTAGAGAATA CAAAACCGAC TGAGTAA
|
|---|
| Protein sequence | MALTKAEMAE HLFEKLGMNK RDAKDLVEAF FEEVREALES GEQVKLSGFG NFDLRQKSER
PGRNPKTGED IPIKARRVVT FRPGQKLKSR VENTKPTE
|
|---|
| |