More than 300 homologs were found in PanDaTox collection
for query gene Ppro_1181 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_1181  histone family protein DNA-binding protein  100 
 
 
92 aa  182  1.0000000000000001e-45  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  81.52 
 
 
92 aa  151  2.9999999999999998e-36  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  64.44 
 
 
90 aa  127  7.000000000000001e-29  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  65.93 
 
 
91 aa  125  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  63.33 
 
 
90 aa  121  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  63.33 
 
 
90 aa  121  4e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  62.64 
 
 
91 aa  120  8e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  62.64 
 
 
91 aa  120  8e-27  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  64.13 
 
 
94 aa  118  3e-26  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  64.13 
 
 
94 aa  117  3.9999999999999996e-26  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  61.11 
 
 
90 aa  118  3.9999999999999996e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  63.04 
 
 
94 aa  115  9.999999999999999e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  61.11 
 
 
90 aa  116  9.999999999999999e-26  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3532  histone family protein DNA-binding protein  61.11 
 
 
90 aa  116  9.999999999999999e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  60 
 
 
90 aa  115  1.9999999999999998e-25  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  60.67 
 
 
90 aa  115  1.9999999999999998e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  58.89 
 
 
90 aa  114  3.9999999999999997e-25  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  59.55 
 
 
90 aa  114  5e-25  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  60.87 
 
 
94 aa  114  6e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  60.87 
 
 
94 aa  114  6e-25  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  60.67 
 
 
91 aa  113  7.999999999999999e-25  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_011663  Sbal223_3761  histone family protein DNA-binding protein  57.78 
 
 
90 aa  113  8.999999999999998e-25  Shewanella baltica OS223  Bacteria  normal  normal  0.768478 
 
 
-
 
NC_009052  Sbal_0507  histone family protein DNA-binding protein  57.78 
 
 
90 aa  113  8.999999999999998e-25  Shewanella baltica OS155  Bacteria  normal  0.0267079  n/a   
 
 
-
 
NC_009438  Sputcn32_3325  histone family protein DNA-binding protein  57.78 
 
 
90 aa  113  8.999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3943  histone family protein DNA-binding protein  57.78 
 
 
90 aa  113  8.999999999999998e-25  Shewanella baltica OS195  Bacteria  normal  0.37618  normal 
 
 
-
 
NC_009665  Shew185_3817  histone family protein DNA-binding protein  57.78 
 
 
90 aa  113  8.999999999999998e-25  Shewanella baltica OS185  Bacteria  normal  0.531766  n/a   
 
 
-
 
NC_008321  Shewmr4_0548  histone family protein DNA-binding protein  56.67 
 
 
90 aa  112  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  60.67 
 
 
91 aa  111  3e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  61.8 
 
 
91 aa  111  3e-24  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  57.78 
 
 
90 aa  111  4.0000000000000004e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  57.78 
 
 
90 aa  111  4.0000000000000004e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3482  histone family protein DNA-binding protein  56.67 
 
 
90 aa  111  4.0000000000000004e-24  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3158  histone-like DNA-binding protein  58.89 
 
 
90 aa  111  4.0000000000000004e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  57.14 
 
 
91 aa  110  5e-24  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  60.44 
 
 
91 aa  110  5e-24  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  61.8 
 
 
96 aa  110  6e-24  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal 
 
 
-
 
NC_008577  Shewana3_0547  histone family protein DNA-binding protein  55.56 
 
 
90 aa  110  6e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  59.55 
 
 
90 aa  110  7.000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  61.8 
 
 
95 aa  110  7.000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_004347  SO_0548  HU family DNA-binding protein  55.56 
 
 
90 aa  110  1.0000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  56.18 
 
 
90 aa  109  1.0000000000000001e-23  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  58.43 
 
 
90 aa  109  1.0000000000000001e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0802524 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  58.89 
 
 
90 aa  109  2.0000000000000002e-23  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  55.56 
 
 
90 aa  108  2.0000000000000002e-23  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_008261  CPF_2802  DNA-binding protein HU  59.34 
 
 
91 aa  108  3e-23  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000000141643  n/a   
 
 
-
 
NC_008262  CPR_2488  DNA-binding protein HU  59.34 
 
 
91 aa  108  3e-23  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000405619  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  58.89 
 
 
91 aa  108  3e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  108  4.0000000000000004e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  108  4.0000000000000004e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  108  4.0000000000000004e-23  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  58.89 
 
 
90 aa  107  5e-23  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  55.06 
 
 
91 aa  107  5e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  58.24 
 
 
91 aa  107  6e-23  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  55.56 
 
 
90 aa  107  7.000000000000001e-23  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  55.56 
 
 
90 aa  107  7.000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00392  HU, DNA-binding transcriptional regulator, beta subunit  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3169  histone family protein DNA-binding protein  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli DH1  Bacteria  hitchhiker  0.000005828  n/a   
 
 
-
 
NC_010658  SbBS512_E0363  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00017145  n/a   
 
 
-
 
NC_010468  EcolC_3192  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli ATCC 8739  Bacteria  normal  0.0216859  hitchhiker  0.00242013 
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  58.89 
 
 
90 aa  107  8.000000000000001e-23  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_012892  B21_00396  hypothetical protein  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal 
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_011353  ECH74115_0526  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  107  8.000000000000001e-23  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00026983  normal  0.698185 
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  53.93 
 
 
91 aa  106  9.000000000000001e-23  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  1e-22  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_011205  SeD_A0493  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.107938  normal 
 
 
-
 
NC_011094  SeSA_A0510  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0507646  normal 
 
 
-
 
NC_011083  SeHA_C0554  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00736621  normal 
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  1e-22  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_011149  SeAg_B0491  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0126716  n/a   
 
 
-
 
NC_011080  SNSL254_A0500  transcriptional regulator HU subunit beta  56.67 
 
 
90 aa  106  1e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.332585  normal  0.0268714 
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  57.78 
 
 
90 aa  105  2e-22  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_012560  Avin_23600  histone-like DNA-binding protein  60 
 
 
90 aa  105  3e-22  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  58.89 
 
 
91 aa  105  3e-22  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  57.78 
 
 
91 aa  105  3e-22  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  57.78 
 
 
90 aa  104  3e-22  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal 
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  56.67 
 
 
90 aa  104  4e-22  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  56.67 
 
 
90 aa  104  4e-22  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  54.44 
 
 
91 aa  104  4e-22  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_009727  CBUD_0508  DNA-binding protein HU  53.33 
 
 
94 aa  104  5e-22  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.000000377509  n/a   
 
 
-
 
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