Gene Shewmr4_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0548 
Symbol 
ID4251776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp633560 
End bp633832 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content43% 
IMG OID638117107 
Producthistone family protein DNA-binding protein 
Protein accessionYP_732685 
Protein GI113968892 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CTGAACTTAT TGCCAAGATT GCAGAAAATG CCGATATCAC TAAAGCTGAA 
GCAGCACGTG CATTGAAATC TTTCGAAGCA GCTATTACTG AATCAATGAA AAACGGTGAC
AAGATCTCTA TCGTTGGATT TGGCTCTTTT GAAACCTCCA CTCGCGCAGC TCGTACTGGC
CGTAACCCAC AGACAGGTAA AGAAATTCAG ATCGCTGAAG CCACTGTGCC TAAGTTTAAA
GCGGGTAAAA CCTTGCGTGA TAGTGTGAAC TAA
 
Protein sequence
MNKTELIAKI AENADITKAE AARALKSFEA AITESMKNGD KISIVGFGSF ETSTRAARTG 
RNPQTGKEIQ IAEATVPKFK AGKTLRDSVN