| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2802 |
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| Symbol | hup |
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| ID | 4201638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3059441 |
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| End bp | 3059716 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638083670 |
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| Product | DNA-binding protein HU |
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| Protein accession | YP_697167 |
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| Protein GI | 110801137 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000141643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAG CAGAATTAAT AACAAGCATG GCTGAAAAAA GCAACTTAAC TAAAAAAGAT
GCTGAATTAG CTTTAAAAGC ATTCATAGAA AGCGTTAGCG AAACTTTAGA AAATGGTGAC
AAAGTTCAAT TAGTTGGATT CGGAACTTTC GAAACTAGAG TAAGAGCTGA AAGAGAAGGA
AGAAACCCAA GAACTAAAGA AGTTATAAAA ATACCTGCTT CAATAGCTCC TGTATTCAAG
CCAGGTAAAG AGTTAAAAGA AAGAGTTAAC GCTTAA
|
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| Protein sequence | MNKAELITSM AEKSNLTKKD AELALKAFIE SVSETLENGD KVQLVGFGTF ETRVRAEREG
RNPRTKEVIK IPASIAPVFK PGKELKERVN A
|
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