| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1686 |
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| Symbol | hupB |
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| ID | 3724393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1968003 |
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| End bp | 1968275 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637751288 |
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| Product | DNA-binding protein HU-beta, NS1(HU-1) |
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| Protein accession | YP_357099 |
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| Protein GI | 77919284 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 6.460310000000001e-19 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCAAAG CCGATCTTGT CAATGCAATG GCTGAGAAAG CAGGGCTTAG CAAAGCCGAA
ACCGAAAAAG CCATCAAGGC ATTTACCGAT GTTATTACTG AAGCTCTGAA AGCCGGAGAA
AAAGTAGCGC TGGTCGGATT TGGCACCTTC AGCGTCGGTG AACGAGCTGC TCGTGTAGGG
CAGAATCCTC AAACCGGCGA AAAGATGAAT ATCCCTGCCG CTAAGGTTCC TAAGTTCAAG
CCTGGCAAGG CACTGAAAGA CTCTGTTAAC TAA
|
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| Protein sequence | MTKADLVNAM AEKAGLSKAE TEKAIKAFTD VITEALKAGE KVALVGFGTF SVGERAARVG
QNPQTGEKMN IPAAKVPKFK PGKALKDSVN
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