| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0526 |
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| Symbol | hupB |
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| ID | 6971132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 531089 |
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| End bp | 531361 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643384573 |
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| Product | transcriptional regulator HU subunit beta |
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| Protein accession | YP_002269087 |
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| Protein GI | 209399224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00026983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.698185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAAAT CTCAATTGAT CGACAAGATT GCTGCAGGGG CTGATATCTC TAAAGCTGCG
GCTGGCCGTG CGTTAGATGC TATTATTGCT TCCGTAACTG AATCTCTGAA AGAAGGGGAT
GATGTAGCAC TGGTAGGTTT TGGTACTTTT GCCGTTAAAG AGCGTGCTGC CCGTACTGGC
CGCAACCCGC AGACCGGTAA AGAGATCACC ATCGCTGCCG CTAAAGTACC GAGCTTCCGT
GCAGGTAAAG CACTGAAAGA CGCGGTAAAC TAA
|
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| Protein sequence | MNKSQLIDKI AAGADISKAA AGRALDAIIA SVTESLKEGD DVALVGFGTF AVKERAARTG
RNPQTGKEIT IAAAKVPSFR AGKALKDAVN
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