Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0526 |
Symbol | hupB |
ID | 6971132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 531089 |
End bp | 531361 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643384573 |
Product | transcriptional regulator HU subunit beta |
Protein accession | YP_002269087 |
Protein GI | 209399224 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00026983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.698185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAAAT CTCAATTGAT CGACAAGATT GCTGCAGGGG CTGATATCTC TAAAGCTGCG GCTGGCCGTG CGTTAGATGC TATTATTGCT TCCGTAACTG AATCTCTGAA AGAAGGGGAT GATGTAGCAC TGGTAGGTTT TGGTACTTTT GCCGTTAAAG AGCGTGCTGC CCGTACTGGC CGCAACCCGC AGACCGGTAA AGAGATCACC ATCGCTGCCG CTAAAGTACC GAGCTTCCGT GCAGGTAAAG CACTGAAAGA CGCGGTAAAC TAA
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Protein sequence | MNKSQLIDKI AAGADISKAA AGRALDAIIA SVTESLKEGD DVALVGFGTF AVKERAARTG RNPQTGKEIT IAAAKVPSFR AGKALKDAVN
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