Gene Dred_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0115 
Symbol 
ID4956056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp122866 
End bp123153 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content46% 
IMG OID640179269 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001111490 
Protein GI134297994 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.552761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAAGG CCGAGCTGAT TTCTGCAGTA GCAGAAAAAA CCGAATTGAG TAAGAAAGAC 
GCCGAAAAGG CAGTTTCTGC TGTCCTTGGT AGCATTGAAG AAGCTTTAGC AAAGGGTGAT
AAGATTCAAC TGGTGGGTTT TGGTACCTTT GAATCCAAAC CTCGCAAAGC CCGTGAAGGC
CGCAACCCAC AAACCGGGGA TACCATTCAA ATCCCTGCCA CCAGAGTGCC TGTATTCAAA
GCAGGTAAAG TGTTAAAGGA TGCTGTGGCA AATCTCCCTG TAGAATAA
 
Protein sequence
MNKAELISAV AEKTELSKKD AEKAVSAVLG SIEEALAKGD KIQLVGFGTF ESKPRKAREG 
RNPQTGDTIQ IPATRVPVFK AGKVLKDAVA NLPVE