More than 300 homologs were found in PanDaTox collection
for query gene GM21_3008 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012918  GM21_3008  histone family protein DNA-binding protein  100 
 
 		 91 aa  182  1.0000000000000001e-45  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  98.9 
 
 		 91 aa  181  4.0000000000000006e-45  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  69.23 
 
 		 91 aa  127  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  64.44 
 
 		 92 aa  124  4.0000000000000003e-28  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  62.64 
 
 		 92 aa  120  8e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  61.8 
 
 		 96 aa  115  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal  1 
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  61.11 
 
 		 90 aa  114  6e-25  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  61.11 
 
 		 91 aa  113  1.0000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_008345  Sfri_3532  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  111  3e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  61.54 
 
 		 91 aa  110  5e-24  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  58.43 
 
 		 94 aa  110  6e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  58.43 
 
 		 94 aa  110  6e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  63.33 
 
 		 90 aa  110  8.000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  58.43 
 
 		 91 aa  110  9e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  58.24 
 
 		 94 aa  109  1.0000000000000001e-23  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_009438  Sputcn32_3325  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  108  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3817  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  108  2.0000000000000002e-23  Shewanella baltica OS185  Bacteria  normal  0.531766  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  57.78 
 
 		 90 aa  108  2.0000000000000002e-23  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_009052  Sbal_0507  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  108  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  0.0267079  n/a   
 
 
-
 
NC_009997  Sbal195_3943  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  108  2.0000000000000002e-23  Shewanella baltica OS195  Bacteria  normal  0.37618  normal  1 
 
 
-
 
NC_011663  Sbal223_3761  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  108  2.0000000000000002e-23  Shewanella baltica OS223  Bacteria  normal  1  normal  0.768478 
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  57.78 
 
 		 95 aa  108  3e-23  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_0658  histone-like DNA-binding protein  56.67 
 
 		 90 aa  108  3e-23  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  107  4.0000000000000004e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  107  5e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_2215  histone family protein DNA-binding protein  61.36 
 
 		 95 aa  107  5e-23  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000076232  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  58.89 
 
 		 91 aa  107  6e-23  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  107  6e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  56.18 
 
 		 90 aa  107  6e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  107  6e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  107  7.000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  106  9.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  106  9.000000000000001e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  57.78 
 
 		 90 aa  106  1e-22  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  59.34 
 
 		 94 aa  106  1e-22  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  54.44 
 
 		 90 aa  106  1e-22  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  54.95 
 
 		 96 aa  106  1e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal  1 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  58.43 
 
 		 91 aa  105  2e-22  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_009656  PSPA7_3493  DNA-binding protein HU  57.78 
 
 		 90 aa  105  2e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.175993  n/a   
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  57.78 
 
 		 90 aa  105  2e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_41210  DNA-binding protein HU  57.78 
 
 		 90 aa  105  2e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0758892  normal  0.416187 
 
 
-
 
NC_009511  Swit_0045  histone family protein DNA-binding protein  55.56 
 
 		 90 aa  105  2e-22  Sphingomonas wittichii RW1  Bacteria  decreased coverage  0.00000165888  normal  1 
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  105  3e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2053  nucleoid protein HU beta subunit  57.78 
 
 		 90 aa  105  3e-22  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000457213  normal  0.0670315 
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  58.89 
 
 		 90 aa  104  3e-22  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_008321  Shewmr4_0548  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  105  3e-22  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  104  4e-22  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_008577  Shewana3_0547  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  104  4e-22  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0600  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  104  4e-22  Halorhodospira halophila SL1  Bacteria  normal  0.0791658  n/a   
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  51.69 
 
 		 90 aa  104  5e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_010501  PputW619_1745  histone family protein DNA-binding protein  57.78 
 
 		 90 aa  103  6e-22  Pseudomonas putida W619  Bacteria  normal  0.693876  hitchhiker  0.00044049 
 
 
-
 
NC_004347  SO_0548  HU family DNA-binding protein  53.33 
 
 		 90 aa  103  6e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3482  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  103  6e-22  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  103  7e-22  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  57.3 
 
 		 91 aa  103  7e-22  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  55.06 
 
 		 91 aa  103  8e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  53.93 
 
 		 94 aa  102  1e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  55.06 
 
 		 90 aa  102  1e-21  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  53.93 
 
 		 94 aa  102  1e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  56.67 
 
 		 90 aa  103  1e-21  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal  1 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  56.67 
 
 		 90 aa  103  1e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  103  1e-21  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  102  2e-21  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  53.93 
 
 		 90 aa  102  2e-21  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  102  2e-21  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal  1 
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  102  2e-21  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  56.32 
 
 		 91 aa  102  2e-21  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_008609  Ppro_2665  histone family protein DNA-binding protein  55.68 
 
 		 91 aa  102  2e-21  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.00920373  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  102  2e-21  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  102  2e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_012560  Avin_23600  histone-like DNA-binding protein  56.67 
 
 		 90 aa  102  2e-21  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  55.56 
 
 		 90 aa  101  3e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  55.06 
 
 		 95 aa  101  3e-21  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  101  3e-21  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  55.06 
 
 		 90 aa  101  3e-21  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  55.56 
 
 		 90 aa  101  3e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  51.69 
 
 		 90 aa  101  3e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  53.33 
 
 		 91 aa  101  3e-21  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  51.69 
 
 		 90 aa  101  4e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  55.56 
 
 		 90 aa  101  4e-21  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  50.56 
 
 		 90 aa  100  5e-21  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  50.56 
 
 		 90 aa  100  5e-21  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_2063  HU family DNA-binding protein  53.33 
 
 		 91 aa  100  6e-21  Colwellia psychrerythraea 34H  Bacteria  normal  0.832344  n/a   
 
 
-
 
NC_007643  Rru_A1553  histone-like DNA-binding protein  53.85 
 
 		 91 aa  100  6e-21  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
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