Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0045 |
Symbol | |
ID | 5200504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 46707 |
End bp | 46979 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640579582 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_001260556 |
Protein GI | 148552974 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000165888 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC AGGAGCTTAT CGGCACCGTC GCCGAGGCCA CCGGCATGAC CAAGAATGAT GCTTCGAAGG CGGTCGAAGC TGTGTTCGAT TCGATTACCA CCCAGCTCAA GAAGGGCGAC GAGGTCCGCC TCGTCGGTTT CGGCACTTTC TCGGTGACGA AGCGCAAGGC CTCCACCGGC CGCAACCCGC GCACCGGCGA ACCCATGAAG ATCAGCGCAT CGAGCCAGCC CAAGTTCAAG CCGGGCAAGG GCCTGAAGGA CGCCGTCAAC TAG
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Protein sequence | MNKQELIGTV AEATGMTKND ASKAVEAVFD SITTQLKKGD EVRLVGFGTF SVTKRKASTG RNPRTGEPMK ISASSQPKFK PGKGLKDAVN
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