More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2107 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008554  Sfum_2107  histone family protein DNA-binding protein  100 
 
 		 90 aa  174  4e-43  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  65.56 
 
 		 90 aa  120  7e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  62.92 
 
 		 94 aa  116  9.999999999999999e-26  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_008751  Dvul_1364  histone family protein DNA-binding protein  62.22 
 
 		 90 aa  115  9.999999999999999e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  60.67 
 
 		 91 aa  114  5e-25  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  61.11 
 
 		 90 aa  114  5e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_013173  Dbac_2463  histone family protein DNA-binding protein  60 
 
 		 90 aa  113  1.0000000000000001e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0228112  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  60.67 
 
 		 90 aa  113  1.0000000000000001e-24  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  59.34 
 
 		 91 aa  110  8.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  60 
 
 		 90 aa  109  1.0000000000000001e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.0802524 
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  60.67 
 
 		 90 aa  109  2.0000000000000002e-23  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  58.43 
 
 		 91 aa  108  3e-23  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  58.43 
 
 		 91 aa  108  3e-23  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  60 
 
 		 91 aa  108  3e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_1090  histone family protein DNA-binding protein  55.06 
 
 		 90 aa  107  5e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2058  histone-like DNA-binding protein  57.78 
 
 		 90 aa  107  6e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.954956  n/a   
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  61.54 
 
 		 91 aa  106  9.000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  58.43 
 
 		 96 aa  104  3e-22  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal  1 
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  59.34 
 
 		 91 aa  105  3e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  57.3 
 
 		 91 aa  104  4e-22  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  58.43 
 
 		 91 aa  104  4e-22  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  58.43 
 
 		 94 aa  103  5e-22  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  58.43 
 
 		 94 aa  103  8e-22  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  58.43 
 
 		 94 aa  103  9e-22  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  58.43 
 
 		 91 aa  103  9e-22  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  55.56 
 
 		 90 aa  101  3e-21  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  51.69 
 
 		 92 aa  101  3e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_008609  Ppro_2665  histone family protein DNA-binding protein  57.47 
 
 		 91 aa  101  3e-21  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.00920373  n/a   
 
 
-
 
NC_011769  DvMF_2799  histone family protein DNA-binding protein  59.34 
 
 		 91 aa  102  3e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_007643  Rru_A1553  histone-like DNA-binding protein  56.67 
 
 		 91 aa  100  4e-21  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal  1 
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  53.93 
 
 		 90 aa  101  4e-21  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  56.18 
 
 		 91 aa  100  5e-21  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_010814  Glov_2215  histone family protein DNA-binding protein  59.77 
 
 		 95 aa  100  5e-21  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000076232  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  52.22 
 
 		 90 aa  100  5e-21  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  100  6e-21  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  56.18 
 
 		 94 aa  100  7e-21  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  56.18 
 
 		 94 aa  100  7e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  55.56 
 
 		 91 aa  100  7e-21  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  99.8  1e-20  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  52.81 
 
 		 90 aa  98.6  2e-20  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_008009  Acid345_4704  histone-like DNA-binding protein  58.82 
 
 		 93 aa  99  2e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.833222 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  52.81 
 
 		 90 aa  98.6  2e-20  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal  1 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  51.11 
 
 		 90 aa  98.6  3e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  54.44 
 
 		 91 aa  98.2  3e-20  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  54.44 
 
 		 90 aa  98.6  3e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  54.44 
 
 		 91 aa  98.2  3e-20  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  53.33 
 
 		 90 aa  97.8  4e-20  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  53.93 
 
 		 92 aa  97.4  5e-20  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_008261  CPF_2802  DNA-binding protein HU  52.81 
 
 		 91 aa  97.8  5e-20  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000000141643  n/a   
 
 
-
 
NC_008262  CPR_2488  DNA-binding protein HU  52.81 
 
 		 91 aa  97.8  5e-20  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000405619  n/a   
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  51.69 
 
 		 91 aa  97.4  5e-20  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_003295  RSc1714  DNA-binding protein HU-beta  52.22 
 
 		 90 aa  97.1  7e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.606946  normal  0.0324854 
 
 
-
 
NC_010002  Daci_2879  histone family protein DNA-binding protein  55.17 
 
 		 90 aa  97.1  8e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  55.29 
 
 		 91 aa  97.1  8e-20  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  53.33 
 
 		 96 aa  97.1  8e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal  1 
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  52.81 
 
 		 91 aa  97.1  8e-20  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  52.22 
 
 		 91 aa  96.7  1e-19  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  54.44 
 
 		 91 aa  96.7  1e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  51.69 
 
 		 91 aa  96.3  1e-19  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  52.22 
 
 		 90 aa  96.7  1e-19  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  53.93 
 
 		 91 aa  96.7  1e-19  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  50 
 
 		 90 aa  95.5  2e-19  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  53.93 
 
 		 90 aa  95.5  2e-19  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A1509  DNA-binding protein HU-beta  55.17 
 
 		 90 aa  95.5  2e-19  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000490467  n/a   
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  51.69 
 
 		 92 aa  95.5  2e-19  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_010003  Pmob_1910  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  95.9  2e-19  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000000311196  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  53.33 
 
 		 90 aa  95.5  2e-19  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  95.1  3e-19  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal  1 
 
 
-
 
NC_009943  Dole_2857  histone family protein DNA-binding protein  56.67 
 
 		 90 aa  95.1  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000000465869  n/a   
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  94.7  4e-19  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  94.7  4e-19  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_010506  Swoo_3110  histone family protein DNA-binding protein  50 
 
 		 90 aa  94.4  5e-19  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000105676  hitchhiker  0.00000299463 
 
 
-
 
NC_012856  Rpic12D_1533  histone family protein DNA-binding protein  51.11 
 
 		 90 aa  94.4  5e-19  Ralstonia pickettii 12D  Bacteria  normal  0.753498  normal  0.353479 
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  52.22 
 
 		 90 aa  94.4  5e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0470  histone family protein DNA-binding protein  50 
 
 		 94 aa  94.4  5e-19  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_02474  DNA-binding protein HU  52.81 
 
 		 90 aa  94  6e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  48.89 
 
 		 90 aa  94  6e-19  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  50.56 
 
 		 91 aa  94  6e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_010682  Rpic_1866  histone family protein DNA-binding protein  51.11 
 
 		 90 aa  93.6  8e-19  Ralstonia pickettii 12J  Bacteria  normal  0.0187787  hitchhiker  0.00274705 
 
 
-
 
NC_008700  Sama_3158  histone-like DNA-binding protein  47.19 
 
 		 90 aa  93.6  8e-19  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002950  PG0121  DNA-binding protein HU  47.73 
 
 		 88 aa  93.6  9e-19  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00022412 
 
 
-
 
NC_013456  VEA_004041  DNA-binding protein HU-beta  54.02 
 
 		 90 aa  93.6  9e-19  Vibrio sp. Ex25  Bacteria  unclonable  0.000000015142  n/a   
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  93.6  9e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
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