| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1509 |
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| Symbol | hupB |
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| ID | 5135202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1622013 |
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| End bp | 1622285 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532967 |
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| Product | DNA-binding protein HU-beta |
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| Protein accession | YP_001217452 |
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| Protein GI | 147673385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000490467 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAGA CACAACTAGT AGAACAAATT GCAGCGAACG CAGATATCTC TAAAGCCTCT
GCAGGTCGCG CTCTTGACGC ATTCATCGAA GCAGTCAGCG GCACACTACA ATCAGGTGAC
CAAGTGGCAC TGGTTGGTTT TGGTACGTTC AGCGTACGTA CTCGCGCAGC GCGTACTGGT
CGTAACCCAA AAACTGGCGA AGAGATCAAA ATCGCTGAAG CGAAAGTGCC TTCATTCAAA
GCAGGTAAAG CTCTGAAAGA CGCTTGCAAC TAA
|
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| Protein sequence | MNKTQLVEQI AANADISKAS AGRALDAFIE AVSGTLQSGD QVALVGFGTF SVRTRAARTG
RNPKTGEEIK IAEAKVPSFK AGKALKDACN
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